RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 NTN3O00634 580 aaPredicted RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 FTH1P19P0C7X4 201 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 RPL27AP46776 148 aaKnown RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 SLC25A48Q6ZT89 311 aaKnown RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 C9orf106Q8NAJ2 232 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 TMEM178AQ8NBL3 297 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 OR4C13Q8NGP0 309 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 OSR1Q8TAX0 266 aaPredicted RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 ZNF479Q96JC4 524 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 ATP6V0BQ99437 205 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 CHAC1Q9BUX1 264 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 KLK15Q9H2R5 256 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 PSG8Q9UQ74 426 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 IGKV1D-37A0A075B6S9 117 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 LOC107984156A0A0G2JMH3 177 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 C19orf71A6NCJ1 209 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 LEPP41159 167 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 CD300EQ496F6 205 aaPredicted RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 PMS2CLQ68D20 193 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 IGFL4Q6B9Z1 124 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 C1orf122Q6ZSJ8 110 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 ARL17AQ8IVW1 177 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 C8orf49Q96NF6 230 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 VGLL1Q99990 258 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 MLST8Q9BVC4 326 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 C7orf69Q9H7B7 122 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 PROCRQ9UNN8 238 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 C9orf172C9J069 976 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 NDUFS8O00217 210 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 ZNF418Q8TF45 676 aaPredicted RBP5.33□□□□□ -1.56
LMO3-235ENST00000616247 FER1L6-AS2Q96M78 137 aa5.33□□□□□ -1.56
LMO3-235ENST00000616247 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 NPIPB6E9PJ23 425 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 NDUFS7O75251 213 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 NPYP01303 97 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 FGF6P10767 208 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 Q8TAT8 98 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 RITA1Q96K30 269 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 ZNF492Q9P255 531 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 DSCAMO60469 2012 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 NPIPB5A8MRT5 1133 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 LAMTOR5O43504 91 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 NDUFA3O95167 84 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 IGKV3-15P01624 115 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 COX7A1P24310 79 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 CNTFRP26992 372 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 KIR2DL2P43627 348 aaPredicted RBP5.32□□□□□ -1.56
LMO3-235ENST00000616247 INSL3P51460 131 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
LMO3-235ENST00000616247 CT83Q5H943 113 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 SLC25A39Q9BZJ4 359 aaPredicted RBP5.32□□□□□ -1.56
LMO3-235ENST00000616247 TMEM133Q9H2Q1 129 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 AAMDCQ9H7C9 122 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 OTORQ9NRC9 128 aa5.32□□□□□ -1.56
LMO3-235ENST00000616247 PTPRZ1P23471 2315 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 IL4P05112 153 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 ARL3P36405 182 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 POU2AF1Q16633 256 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 LGALS9BQ3B8N2 356 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 MRPL51Q4U2R6 128 aaKnown RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 C8orf46Q8TAG6 207 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 GFRA4Q9GZZ7 299 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 UFC1Q9Y3C8 167 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 KLF12Q9Y4X4 402 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 AGRNO00468 2067 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 IGKV2-40A0A087WW87 121 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 CGB1A6NKQ9 187 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 H3BVH4 76 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 IGKV2D-40P01614 121 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 GATA1P15976 413 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 KLF17Q5JT82 389 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 TMEM75Q8N9X5 138 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 BOD1L1Q8NFC6 3051 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 SPAG8Q99932 426 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 SCNM1Q9BWG6 230 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 FBXL15Q9H469 300 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 MAP1LC3AQ9H492 121 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 ASPMQ8IZT6 3477 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 TRAV40A0A0B4J280 105 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 SMIM17P0DL12 118 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 GP9P14770 177 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 APOBEC3AP31941 199 aaPredicted RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 ABHD17AQ96GS6 310 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 GAFA1Q96PS6 74 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 SRSF8Q9BRL6 282 aaKnown RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
LMO3-235ENST00000616247 ACACAQ13085 2346 aa5.31□□□□□ -1.56
LMO3-235ENST00000616247 ADAMTS20P59510 1910 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 IGHV3-23P01764 117 aa5.3□□□□□ -1.56
LMO3-235ENST00000616247 MYCNOSP40205 109 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms