RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
TNFAIP3-207ENST00000614035 LYRM1O43325 122 aa12.49□□□□□ -0.41
TNFAIP3-207ENST00000614035 HIST1H1AQ02539 215 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-207ENST00000614035 LINC00305Q7Z4B0 112 aa12.49□□□□□ -0.41
TNFAIP3-207ENST00000614035 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 CCSO14618 274 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 PRM2P04554 102 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 ZNF846Q147U1 533 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 RNF212Q495C1 297 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 TMEM88Q6PEY1 159 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 LRRC20Q8TCA0 184 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 MGST2Q99735 147 aa12.48□□□□□ -0.41
TNFAIP3-207ENST00000614035 A0A1B0GVY2 172 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 PLAC8L1A1L4L8 177 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 TCRBP04435 133 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 RHOBP62745 196 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 UBE2DNLQ8IWF7 75 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 RPUSD4Q96CM3 377 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 ZNF331Q9NQX6 463 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 FAT2Q9NYQ8 4349 aa12.47□□□□□ -0.41
TNFAIP3-207ENST00000614035 L7N2F9 121 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 M0R2N4 97 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 RTL8CO15255 209 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 VAMP2P63027 116 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 BPIFA4PQ86YQ2 179 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 ZNF431Q8TF32 576 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 SLC50A1Q9BRV3 221 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.41
TNFAIP3-207ENST00000614035 COX7A2P2O60397 106 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 AZU1P20160 251 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 TAS2R60P59551 318 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 Q6ZR54 194 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 NUDT15Q9NV35 164 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 PPP1R14DQ9NXH3 145 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 DNAH2Q9P225 4427 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 CDKN1BP46527 198 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 MORN5Q5VZ52 161 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 LINC01587Q99440 93 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 SEC22CQ9BRL7 303 aa12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 LSM5Q9Y4Y9 91 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-207ENST00000614035 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 IGLC2P0DOY2 106 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 CAMLGP49069 296 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 BCAP31P51572 246 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 CAV2P51636 162 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 RAB31Q13636 194 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 OPCMLQ14982 345 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 C10orf113Q5VZT2 155 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 CCDC32Q9BV29 185 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 HERC2O95714 4834 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
TNFAIP3-207ENST00000614035 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 SLC17A3O00476 420 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 CST7O76096 145 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 DEFB130BP0DP73 79 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 DEFB130AP0DP74 79 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 FAM3BP58499 235 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 Q6ZRG5 221 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 NRARPQ7Z6K4 114 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 C20orf144Q9BQM9 153 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 DNAJC4Q9NNZ3 241 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 UQCC1Q9NVA1 299 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 PXMP4Q9Y6I8 212 aa12.43□□□□□ -0.42
TNFAIP3-207ENST00000614035 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 PRB4P10163 310 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 PVALBP20472 110 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 IL15RAQ13261 267 aa12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 FCN2Q15485 313 aa12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 SAT2Q96F10 170 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-207ENST00000614035 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 CBY3A6NI87 242 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 H3BQ15 152 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 H7BYZ3 331 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 MIC13Q5XKP0 118 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 RNASE8Q8TDE3 154 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 TMEM263Q8WUH6 116 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 LYRM2Q9NU23 88 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 PKHD1P08F94 4074 aa12.41□□□□□ -0.42
TNFAIP3-207ENST00000614035 KIAA1109Q2LD37 5005 aa12.4□□□□□ -0.42
TNFAIP3-207ENST00000614035 DNAH17Q9UFH2 4485 aa12.4□□□□□ -0.42
TNFAIP3-207ENST00000614035 PRAC2D3DTV9 90 aa12.4□□□□□ -0.42
TNFAIP3-207ENST00000614035 H3BTX0 84 aa12.4□□□□□ -0.42
TNFAIP3-207ENST00000614035 ATP5G1P05496 136 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms