RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 SRRM5B3KS81 715 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 ATP5G1P05496 136 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 SLC25A16P16260 332 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 FAM223AQ8IWN6 122 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 GATD1Q8NB37 220 aa5.59□□□□□ -1.51
CLCN3-211ENST00000613795 IGHG3P01860 377 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 HLA-DRB4P13762 266 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 GATA3P23771 443 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 FOXI1Q12951 378 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 STHQ8IWL8 128 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.52
CLCN3-211ENST00000613795 USMG5Q96IX5 58 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 CYYR1Q96J86 154 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 HLA-DRB4X5D2U9 266 aa5.59□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 MBD3L4A6NDZ8 208 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 MBD3L3A6NE82 208 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 MBD3L5A6NJ08 208 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 H0YJW9 148 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 SYNJ2BPP57105 145 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 HERV-K104P63124 156 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 PDE6HQ13956 83 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 VWC2Q2TAL6 325 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 AMTNQ6UX39 209 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 CLEC19AQ6UXS0 136 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 LCNL1Q6ZST4 164 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 MBD3L2Q8NHZ7 208 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV1-46P01743 117 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 EXOC3-AS1Q8N2X6 119 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 ZNF114Q8NC26 417 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 LINC01587Q99440 93 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 ANK1P16157 1881 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-64A0A075B6Q5 118 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 PPIFP30405 207 aaKnown RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 GGNQ86UU5 652 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 CARD19Q96LW7 228 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 UBL5Q9BZL1 73 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 PRSS29PA6NIE9 313 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 F8VRH5 84 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 SH2D6Q7Z4S9 175 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 RPUSD1Q9UJJ7 312 aaKnown RBP5.58□□□□□ -1.52
CLCN3-211ENST00000613795 PMS2P5A8MQ11 134 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 CD7P09564 240 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 LY6G5BQ8NDX9 201 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 MDS2Q8NDY4 140 aa5.58□□□□□ -1.52
CLCN3-211ENST00000613795 PLXNA3P51805 1871 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
CLCN3-211ENST00000613795 TDRG1Q3Y452 100 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV2-40A0A087WW87 121 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-211ENST00000613795 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV2D-40P01614 121 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-211ENST00000613795 CFHR2P36980 270 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 SCN2AQ99250 2005 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV3OR2-268A0A0C4DH90 116 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-211ENST00000613795 NDUFS7O75251 213 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 PAX8Q06710 450 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 FHL1Q13642 323 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 MRPL51Q4U2R6 128 aaKnown RBP5.57□□□□□ -1.52
CLCN3-211ENST00000613795 PRADC1Q9BSG0 188 aa5.57□□□□□ -1.52
CLCN3-211ENST00000613795 A0A087WX48 190 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 TRAV41A0A0B4J266 112 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 A0A1W2PPI3 338 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 LINC00158P58513 81 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 IGF2-ASQ6U949 168 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 ITLN2Q8WWU7 325 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 TMEM178BH3BS89 294 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 CLPSP04118 112 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 SIGLEC15Q6ZMC9 328 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 ZNF837Q96EG3 531 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 NYNRINQ9P2P1 1898 aaKnown RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 B4DSR2 109 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 NUPR1O60356 82 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 CELA3BP08861 270 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 RNASE2P10153 161 aaKnown RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 C9orf139Q6ZV77 190 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 CFC1P0CG37 223 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 RBM3P98179 157 aaKnown RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 PRDM6Q9NQX0 595 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
CLCN3-211ENST00000613795 CNTRLQ7Z7A1 2325 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 K7EMI3 77 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV1-8P0DP01 117 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 NPC2P61916 151 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 LINC00479Q96M42 142 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 V9GYY9 64 aa5.56□□□□□ -1.52
CLCN3-211ENST00000613795 K7EN84 100 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 WFDC2Q14508 124 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 Q6P435 159 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 C2orf66Q6UXQ4 117 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 C1orf147Q96MC9 270 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-66A0A0C4DH42 116 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 IGHV3-23P01764 117 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 GLMPQ8WWB7 406 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 IGKV3D-20A0A0C4DH25 116 aa5.55□□□□□ -1.52
CLCN3-211ENST00000613795 LINC00473A8K010 186 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms