RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 IGHV2-5P01817 119 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 LINC01559Q495D7 138 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 WFDC12Q8WWY7 111 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 MRAP2Q96G30 205 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 IFI27P40305 119 aaPredicted RBP11.08□□□□□ -0.64
GGA3-220ENST00000613421 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 CHTOPQ9Y3Y2 248 aaKnown RBP11.08□□□□□ -0.64
GGA3-220ENST00000613421 GTF3C1Q12789 2109 aa11.08□□□□□ -0.64
GGA3-220ENST00000613421 APOMO95445 188 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 DMRTC2Q8IXT2 367 aaPredicted RBP11.07□□□□□ -0.64
GGA3-220ENST00000613421 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
GGA3-220ENST00000613421 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 A0A1B0GUS0 222 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 A6NNC1 897 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 ZNF114Q8NC26 417 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 ALKBH7Q9BT30 221 aaPredicted RBP11.07□□□□□ -0.64
GGA3-220ENST00000613421 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 H3BRM9 83 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
GGA3-220ENST00000613421 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 TPSG1Q9NRR2 321 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 SELENOKQ9Y6D0 94 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 SYS1-DBNDD2H3BUS1 97 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 TDGF1P13385 188 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 TMEM75Q8N9X5 138 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 VCX2Q9H322 139 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 CACNA1BQ00975 2339 aa11.07□□□□□ -0.64
GGA3-220ENST00000613421 SRRM4A7MD48 611 aaKnown RBP11.06□□□□□ -0.64
GGA3-220ENST00000613421 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 WT1P19544 449 aaPredicted RBP11.06□□□□□ -0.64
GGA3-220ENST00000613421 UNQ6494/PRO21346Q6UXR6 183 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 V9GYV3 84 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 hDV102S1A0JD36 115 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 UBE2E1P51965 193 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 HSD52Q0P140 79 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 DIAPH2-AS1Q14236 149 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 CT83Q5H943 113 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 JMJD8Q96S16 334 aa11.06□□□□□ -0.64
GGA3-220ENST00000613421 ARMS2P0C7Q2 107 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 SEC11AP67812 179 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 IGFL2Q6UWQ7 119 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 STHQ8IWL8 128 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 FXYD7P58549 80 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 C11orf52Q96A22 123 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 NDUFB8O95169 186 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 OR9G4Q8NGQ1 327 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
GGA3-220ENST00000613421 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 A0A1B0GWB2 263 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 C18orf32Q8TCD1 76 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 YAE1D1Q9NRH1 226 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 PRR20EP86478 221 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 PRR20CP86479 221 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 PRR20DP86480 221 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 PRR20BP86481 221 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 PRR20AP86496 221 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
GGA3-220ENST00000613421 KAAG1Q9UBP8 84 aa11.05□□□□□ -0.64
GGA3-220ENST00000613421 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 FNDC4Q9H6D8 234 aaPredicted RBP11.04□□□□□ -0.64
GGA3-220ENST00000613421 ABCA4P78363 2273 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 LINC01549A6NIU2 74 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 TMEM262E9PQX1 116 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 TRGV2A0A075B6R0 118 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 ZNF688P0C7X2 276 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 ERCC8Q13216 396 aa11.04□□□□□ -0.64
GGA3-220ENST00000613421 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
GGA3-220ENST00000613421 THAP8Q8NA92 274 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 SMKR1H3BMG3 65 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 DLEU1O43261 78 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 TMEM131Q92545 1883 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 ZNF815PA8K554 130 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 IGHV2-70P01814 119 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 GUSBP1Q15486 140 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 TMEM249Q2WGJ8 235 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
GGA3-220ENST00000613421 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.64
GGA3-220ENST00000613421 A8MWP6 167 aa11.02□□□□□ -0.65
GGA3-220ENST00000613421 FCN3O75636 299 aa11.02□□□□□ -0.65
GGA3-220ENST00000613421 MRPL52Q86TS9 123 aaKnown RBP11.02□□□□□ -0.65
GGA3-220ENST00000613421 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
GGA3-220ENST00000613421 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
GGA3-220ENST00000613421 SMIM27A0A1W2PRY6 76 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 LHBP01229 141 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 SPRNQ5BIV9 151 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 RUSC1-AS1Q66K80 236 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 C8orf49Q96NF6 230 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 TTC28Q96AY4 2481 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms