RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-211ENST00000612509 ZNF709Q8N972 641 aa13.14□□□□□ -0.31
SEMA3B-211ENST00000612509 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
SEMA3B-211ENST00000612509 TRAV5A0A0B4J249 113 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 IGLC2P0DOY2 106 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 OXA1LQ15070 435 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 GCSAMLQ5JQS6 135 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 Q8NAQ8 132 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 LRRC20Q8TCA0 184 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 X6R8D5 127 aa13.13□□□□□ -0.31
SEMA3B-211ENST00000612509 A8MTW9 85 aa13.12□□□□□ -0.31
SEMA3B-211ENST00000612509 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
SEMA3B-211ENST00000612509 FXYD7P58549 80 aa13.12□□□□□ -0.31
SEMA3B-211ENST00000612509 SLC35B3Q9H1N7 401 aa13.12□□□□□ -0.31
SEMA3B-211ENST00000612509 ZNF331Q9NQX6 463 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-211ENST00000612509 RYR3Q15413 4870 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 H3BTX0 84 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 SLC17A3O00476 420 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 MIFP14174 115 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 CNN1P51911 297 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 PSG9Q00887 426 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 PMS2P11Q13670 270 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
SEMA3B-211ENST00000612509 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 H3BQ15 152 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 DEFB4AO15263 64 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 DUSP14O95147 198 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 PSG3Q16557 428 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 ASB13Q8WXK3 278 aa13.1□□□□□ -0.31
SEMA3B-211ENST00000612509 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 IFNA5P01569 189 aa13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 ZNF705DP0CH99 300 aaPredicted RBP13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 ZNF705BP0CI00 300 aaPredicted RBP13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 WFDC1Q9HC57 220 aa13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 TMEM14CQ9P0S9 112 aa13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-211ENST00000612509 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 GUK1Q16774 197 aa13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 ZNF705AQ6ZN79 300 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 OR8A1Q8NGG7 326 aa13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 SCGB1C1Q8TD33 95 aa13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 MRPL32Q9BYC8 188 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
SEMA3B-211ENST00000612509 RYR2Q92736 4967 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 ZNF253O75346 499 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 RBMY1A1P0DJD3 496 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 RBMY1CP0DJD4 496 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 PYYP10082 97 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 RBMY1FQ15415 496 aaKnown RBP13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 MIR17HGQ75NE6 70 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 SAT2Q96F10 170 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
SEMA3B-211ENST00000612509 NUPR2A6NF83 97 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 SPINK13Q1W4C9 94 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 Q5BKY6 102 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 LYSTQ99698 3801 aa13.06□□□□□ -0.32
SEMA3B-211ENST00000612509 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 M0R2Z0 102 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 NEU1Q99519 415 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 FUT9Q9Y231 359 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 GOLT1BQ9Y3E0 138 aa13.05□□□□□ -0.32
SEMA3B-211ENST00000612509 ALMS1Q8TCU4 4167 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 AMBPP02760 352 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 PDE6HQ13956 83 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 ZNF266Q14584 549 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 C1orf158Q8N1D5 194 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
SEMA3B-211ENST00000612509 FXYD6-FXYD2A0A087WZ82 144 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 CRXO43186 299 aaPredicted RBP13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 NDUFB4O95168 129 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 INSP01308 110 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 RHOBP62745 196 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 BAP18Q8IXM2 172 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 BLNKQ8WV28 456 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 RFNGQ9Y644 331 aa13.03□□□□□ -0.32
SEMA3B-211ENST00000612509 LCE6AA0A183 80 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms