RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 MESP1Q9BRJ9 268 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 F8WEM9 126 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 IGKV1-5P01602 117 aa10.69□□□□□ -0.7
USP6NL-205ENST00000609104 NDUFS6O75380 124 aaKnown RBP10.68□□□□□ -0.7
USP6NL-205ENST00000609104 CACNA1EQ15878 2313 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 MYMXA0A1B0GTQ4 84 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 H0YJW9 148 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 NEUROG3Q9Y4Z2 214 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 NMSQ5H8A3 153 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 GAS1P54826 345 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 GGNQ86UU5 652 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 ANAPC10Q9UM13 185 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 IGLV3-32A0A0A0MS00 114 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 CRYGSP22914 178 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 SS18Q15532 418 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 LOC102723996A0A087X1L8 192 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 CMC4P56277 68 aaPredicted RBP10.68□□□□□ -0.7
USP6NL-205ENST00000609104 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 SPSB3Q6PJ21 355 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 ANAPC1Q9H1A4 1944 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 CHAC1Q9BUX1 264 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 FAM166AQ6J272 317 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 CACNA1BQ00975 2339 aa10.68□□□□□ -0.7
USP6NL-205ENST00000609104 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 LINC00479Q96M42 142 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 FLVCR1-AS1Q8TAF5 88 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 MLANAQ16655 118 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 SRRM5B3KS81 715 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 IGLV3-19P01714 112 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 H3BUX3 64 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 KLHL30-AS1Q8NEE0 82 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 NABP1Q96AH0 204 aa10.67□□□□□ -0.7
USP6NL-205ENST00000609104 MRPL27Q9P0M9 148 aaKnown RBP10.67□□□□□ -0.7
USP6NL-205ENST00000609104 LINC00473A8K010 186 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 TMEM14EPQ6UXP3 125 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 LIME1Q9H400 295 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 TCF15Q12870 199 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 SIGLEC9Q9Y336 463 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 C9orf153Q5TBE3 101 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 MINOS1Q5TGZ0 78 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 MINOS1-NBL1R4GNA1 71 aa10.66□□□□□ -0.7
USP6NL-205ENST00000609104 E9PLN8 166 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 H3BMM0 161 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 RSPO3Q9BXY4 272 aaPredicted RBP10.65□□□□□ -0.7
USP6NL-205ENST00000609104 CITED1Q99966 193 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 VWCEQ96DN2 955 aa10.65□□□□□ -0.7
USP6NL-205ENST00000609104 PLXNA3P51805 1871 aa10.65□□□□□ -0.71
USP6NL-205ENST00000609104 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.71
USP6NL-205ENST00000609104 CD5LO43866 347 aa10.65□□□□□ -0.71
USP6NL-205ENST00000609104 C5orf63A6NC05 138 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 RNF144BQ7Z419 303 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 SIP14410 1827 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 ZNF581Q9P0T4 197 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 CFHR3Q02985 330 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 NCOR1O75376 2440 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 IL17RELQ6ZVW7 336 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 WDR90Q96KV7 1748 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 IL18BPO95998 194 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 Q6P435 159 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 DKK1O94907 266 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 ROS1P08922 2347 aa10.64□□□□□ -0.71
USP6NL-205ENST00000609104 EFNA2O43921 213 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 CFHR2P36980 270 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
USP6NL-205ENST00000609104 PLSCR4Q9NRQ2 329 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-205ENST00000609104 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 OBSL1O75147 1896 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 CNOT1A5YKK6 2376 aaKnown RBP10.63□□□□□ -0.71
USP6NL-205ENST00000609104 LY6G5BQ8NDX9 201 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 MSRB2Q9Y3D2 182 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 TMEM105Q8N8V8 129 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 KIF26AQ9ULI4 1882 aaPredicted RBP10.63□□□□□ -0.71
USP6NL-205ENST00000609104 USMG5Q96IX5 58 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
USP6NL-205ENST00000609104 ARMS2P0C7Q2 107 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 SPACA3Q8IXA5 215 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 GAFA1Q96PS6 74 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 LY96Q9Y6Y9 160 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 DEFB130BP0DP73 79 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 DEFB130AP0DP74 79 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 PRSS57Q6UWY2 283 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 GAGE1Q13065 139 aa10.62□□□□□ -0.71
USP6NL-205ENST00000609104 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms