RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TENM1Q9UKZ4 2725 aa12.49□□□□□ -0.41
PMF1-206ENST00000606952 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 M0QZ24 198 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
PMF1-206ENST00000606952 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
PMF1-206ENST00000606952 PEA15Q15121 130 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 HAGHQ16775 308 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
PMF1-206ENST00000606952 IGHV3-66A0A0C4DH42 116 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 SOCS3O14543 225 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 CD81P60033 236 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
PMF1-206ENST00000606952 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 RARRES2Q99969 163 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 ZNF331Q9NQX6 463 aaPredicted RBP12.47□□□□□ -0.41
PMF1-206ENST00000606952 MLXQ9UH92 298 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 WNK1Q9H4A3 2382 aa12.47□□□□□ -0.41
PMF1-206ENST00000606952 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 SLC17A3O00476 420 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 PSG9Q00887 426 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 SAMD13Q5VXD3 122 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 TCF24Q7RTU0 167 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 EIF5A2Q9GZV4 153 aaKnown RBP12.46□□□□□ -0.41
PMF1-206ENST00000606952 NRN1Q9NPD7 142 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
PMF1-206ENST00000606952 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 ZNF785A8K8V0 405 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 PDE6DO43924 150 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 PF4P02776 101 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 SRP19P09132 144 aaKnown RBP12.45□□□□□ -0.42
PMF1-206ENST00000606952 ATP5G3P48201 142 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 UBE2G2P60604 165 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 C12orf54Q6X4T0 127 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 SLC7A5P1Q8MH63 180 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 Q9H3A6 140 aa12.45□□□□□ -0.42
PMF1-206ENST00000606952 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
PMF1-206ENST00000606952 C9JQL5 133 aa12.44□□□□□ -0.42
PMF1-206ENST00000606952 F6UZH7 168 aa12.44□□□□□ -0.42
PMF1-206ENST00000606952 C5orf17Q8NAS9 161 aa12.44□□□□□ -0.42
PMF1-206ENST00000606952 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
PMF1-206ENST00000606952 TRAV8-2A0A0B4J237 113 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
PMF1-206ENST00000606952 DEFB114Q30KQ6 69 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 C3orf56Q8N813 242 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 MRPL53Q96EL3 112 aaKnown RBP12.43□□□□□ -0.42
PMF1-206ENST00000606952 SLC35B3Q9H1N7 401 aa12.43□□□□□ -0.42
PMF1-206ENST00000606952 H3BTX0 84 aa12.42□□□□□ -0.42
PMF1-206ENST00000606952 ISLRO14498 428 aa12.42□□□□□ -0.42
PMF1-206ENST00000606952 TSPAN4O14817 238 aa12.42□□□□□ -0.42
PMF1-206ENST00000606952 RANP62826 216 aaKnown RBP12.42□□□□□ -0.42
PMF1-206ENST00000606952 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
PMF1-206ENST00000606952 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
PMF1-206ENST00000606952 TMEM218A2RU14 115 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 PGPA6NDG6 321 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 K7EQG2 157 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
PMF1-206ENST00000606952 DYNLRB2Q8TF09 96 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 RPUSD4Q96CM3 377 aaKnown RBP12.41□□□□□ -0.42
PMF1-206ENST00000606952 MDFIQ99750 246 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 TREM1Q9NP99 234 aa12.41□□□□□ -0.42
PMF1-206ENST00000606952 SERTM2A0A1B0GWG4 89 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 TMEM61Q8N0U2 210 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 EXOC3-AS1Q8N2X6 119 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 MS4A6AQ9H2W1 248 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 EPDR1Q9UM22 224 aa12.4□□□□□ -0.42
PMF1-206ENST00000606952 SCO2A0A1W2PP80 73 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 WIPF1O43516 503 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 SLC25A5P05141 298 aaKnown RBP12.39□□□□□ -0.43
PMF1-206ENST00000606952 SFTA3P0C7M3 94 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 INSL3P51460 131 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
PMF1-206ENST00000606952 C10orf91Q5T1B1 145 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 CYB561D1Q8N8Q1 229 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
PMF1-206ENST00000606952 ATG101Q9BSB4 218 aa12.39□□□□□ -0.43
PMF1-206ENST00000606952 COL6A5A8TX70 2615 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 KRBOX1C9JBD0 128 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 PEX7O00628 323 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 TCRAP04437 139 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 PSG3Q16557 428 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 CMTM2Q8TAZ6 248 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 SEC11CQ9BY50 192 aa12.38□□□□□ -0.43
PMF1-206ENST00000606952 KLF12Q9Y4X4 402 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms