RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 REPIN1Q9BWE0 567 aaKnown RBP7.19□□□□□ -1.26
CSMD1-216ENST00000602557 CSRP3P50461 194 aa7.19□□□□□ -1.26
CSMD1-216ENST00000602557 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-216ENST00000602557 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-216ENST00000602557 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
CSMD1-216ENST00000602557 ORMDL2Q53FV1 153 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 LINC00312Q9Y6C7 94 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 LINC00158P58513 81 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 PSG7Q13046 419 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 PRDM6Q9NQX0 595 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 TMEM158Q8WZ71 300 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 SMPXQ9UHP9 88 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 NBR2O15453 112 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 IGLL1P15814 213 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 GAS1P54826 345 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 SPANXA1Q9NS26 97 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 IGHV1-2P23083 117 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
CSMD1-216ENST00000602557 IGHV2-26A0A0B4J1V2 119 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 ZNF474Q6S9Z5 364 aaPredicted RBP7.18□□□□□ -1.26
CSMD1-216ENST00000602557 ZNF497Q6ZNH5 498 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 CRYBA4P53673 196 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 LYZL1Q6UWQ5 148 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 EXOC3-AS1Q8N2X6 119 aa7.18□□□□□ -1.26
CSMD1-216ENST00000602557 C15orf61A6NNL5 157 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 CRPP02741 224 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 RNF125Q96EQ8 232 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 VWC2LB2RUY7 222 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 CCL3L1P16619 93 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 PSG8Q9UQ74 426 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 SRD5A1P18405 259 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 ASPHD1Q5U4P2 390 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 TRAV12-1A0A0B4J245 112 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 ZNF106Q9H2Y7 1883 aaKnown RBP7.17□□□□□ -1.26
CSMD1-216ENST00000602557 CCL1P22362 96 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 SLC25A48Q6ZT89 311 aaKnown RBP7.17□□□□□ -1.26
CSMD1-216ENST00000602557 PPBPP02775 128 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 RPP25LQ8N5L8 163 aaKnown RBP7.17□□□□□ -1.26
CSMD1-216ENST00000602557 ZIC4Q8N9L1 334 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 TRBV6-7A0A0A0MS04 114 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 J3KT08 172 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-216ENST00000602557 TCRAP04437 139 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 VDAC2P45880 294 aaPredicted RBP7.17□□□□□ -1.26
CSMD1-216ENST00000602557 SH2D6Q7Z4S9 175 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 TMEM167AQ8TBQ9 72 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
CSMD1-216ENST00000602557 TECTAO75443 2155 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 C1orf162Q8NEQ5 155 aaPredicted RBP7.16□□□□□ -1.26
CSMD1-216ENST00000602557 COLCA1Q6ZS62 124 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 IQCF6A8MYZ5 107 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 C10orf91Q5T1B1 145 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 C18orf32Q8TCD1 76 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 WIPF3A6NGB9 483 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 FNDC10F2Z333 226 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 FAM90A1Q86YD7 464 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 TRAV40A0A0B4J280 105 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 C9orf106Q8NAJ2 232 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 TEX48A0A1B0GUV7 120 aa7.16□□□□□ -1.26
CSMD1-216ENST00000602557 LINC01549A6NIU2 74 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 Q0VG73 95 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 A0A1W2PR77 199 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 TCRBV4S1A1TA0A5B7 111 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 NRN1LQ496H8 165 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 IGHV2-70DA0A0C4DH43 119 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 PAX4O43316 350 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 RHOGP84095 191 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 PLEKHB2Q96CS7 222 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 LYZL4Q96KX0 146 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 J3QRE1 110 aa7.15□□□□□ -1.26
CSMD1-216ENST00000602557 HERV-K104P63124 156 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 CEND1Q8N111 149 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 HIVEP2P31629 2446 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 ZCCHC24Q8N2G6 241 aaKnown RBP7.15□□□□□ -1.27
CSMD1-216ENST00000602557 TET2Q6N021 2002 aaPredicted RBP7.15□□□□□ -1.27
CSMD1-216ENST00000602557 UPK2O00526 184 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 COX8AP10176 69 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 CFHR2P36980 270 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 ID3Q02535 119 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 C5orf47Q569G3 176 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 AMN1Q8IY45 258 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM133Q9H2Q1 129 aa7.15□□□□□ -1.27
CSMD1-216ENST00000602557 Q8TAT8 98 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 C17orf100A8MU93 164 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 MORN2Q502X0 79 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 C5orf24Q7Z6I8 188 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 IGKV1-9A0A0C4DH69 117 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 RPL15P61313 204 aaKnown RBP7.14□□□□□ -1.27
CSMD1-216ENST00000602557 WBP1Q96G27 269 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM258P61165 79 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 PAQR4Q8N4S7 273 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-216ENST00000602557 FAM57AQ8TBR7 257 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 FGFBP3Q8TAT2 258 aa7.14□□□□□ -1.27
CSMD1-216ENST00000602557 SH2D1AO60880 128 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms