RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	CIB3	Q96Q77	187 aa	Predicted RBP	12.49	□□□□□ -0.41
IRF3-231	ENST00000602190	CXCL2	P19875	107 aa		12.48	□□□□□ -0.41
IRF3-231	ENST00000602190	FUS	P35637	526 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
IRF3-231	ENST00000602190	CLVS1	Q8IUQ0	354 aa	Predicted RBP	12.48	□□□□□ -0.41
IRF3-231	ENST00000602190	SCGB3A2	Q96PL1	93 aa		12.48	□□□□□ -0.41
IRF3-231	ENST00000602190	PTTG2	Q9NZH5	202 aa		12.48	□□□□□ -0.41
IRF3-231	ENST00000602190		K7EPK0	472 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	HTN1	P15515	57 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	ERVFC1-1	P60608	527 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	FGL1	Q08830	312 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	GFI1B	Q5VTD9	330 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	RPUSD4	Q96CM3	377 aa	Known RBP	12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	TMPRSS5	Q9H3S3	457 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.47	□□□□□ -0.41
IRF3-231	ENST00000602190	SCP2D1	Q9UJQ7	156 aa		12.47	□□□□□ -0.41
IRF3-231	ENST00000602190		A0A087WTM6	91 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	GAGE12B	A1L429	117 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	PMS2P5	A8MQ11	134 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	CTDSP2	O14595	271 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	SIVA1	O15304	175 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	SYNGR2	O43760	224 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	MED6	O75586	246 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	GAGE7	O76087	117 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	RLN2	P04090	185 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	GAGE12F	P0CL80	117 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	GAGE12G	P0CL81	117 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	GAGE12I	P0CL82	117 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	ANXA3	P12429	323 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	CYP2G1P	Q6ZSU1	146 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	RABL2B	Q9UNT1	228 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	HIGD1A	Q9Y241	93 aa		12.46	□□□□□ -0.41
IRF3-231	ENST00000602190	RAP2B	P61225	183 aa		12.45	□□□□□ -0.42
IRF3-231	ENST00000602190	PATE2	Q6UY27	113 aa		12.45	□□□□□ -0.42
IRF3-231	ENST00000602190	ODF3	Q96PU9	254 aa		12.45	□□□□□ -0.42
IRF3-231	ENST00000602190	HYPM	O75409	117 aa		12.44	□□□□□ -0.42
IRF3-231	ENST00000602190	RPP30	P78346	268 aa	Known RBP	12.44	□□□□□ -0.42
IRF3-231	ENST00000602190	AKR1C1	Q04828	323 aa		12.44	□□□□□ -0.42
IRF3-231	ENST00000602190	ICAM4	Q14773	271 aa		12.44	□□□□□ -0.42
IRF3-231	ENST00000602190		Q6ZTI0	123 aa		12.44	□□□□□ -0.42
IRF3-231	ENST00000602190	EREG	O14944	169 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	LINC00869	P0C866	280 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	DNAH10OS	P0CZ25	163 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	SELENOT	P62341	195 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	TMEM128	Q5BJH2	165 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	LCN15	Q6UWW0	184 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	CCDC28A	Q8IWP9	274 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	C11orf72	Q8NBR9	251 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	SLC50A1	Q9BRV3	221 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	PPP1R14D	Q9NXH3	145 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	TNFRSF18	Q9Y5U5	241 aa		12.43	□□□□□ -0.42
IRF3-231	ENST00000602190	SNURFL	B1AK76	121 aa		12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	WRB	O00258	174 aa		12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	IL5	P05113	134 aa		12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	SOST	Q9BQB4	213 aa		12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	PYGO2	Q9BRQ0	406 aa		12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	PAIP2B	Q9ULR5	123 aa	Known RBP	12.42	□□□□□ -0.42
IRF3-231	ENST00000602190	PRAC2	D3DTV9	90 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	FNDC10	F2Z333	226 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	NXPH4	O95158	308 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	PRB4	P10163	310 aa	Predicted RBP	12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	SPANXN5	Q5MJ07	72 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	TMED4	Q7Z7H5	227 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	NFE4	Q86UQ8	179 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	LINC00467	Q9BRT7	94 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	MDFIC	Q9P1T7	246 aa		12.41	□□□□□ -0.42
IRF3-231	ENST00000602190	ID3	Q02535	119 aa		12.4	□□□□□ -0.42
IRF3-231	ENST00000602190	CCDC190	Q86UF4	302 aa		12.4	□□□□□ -0.42
IRF3-231	ENST00000602190	ZNF431	Q8TF32	576 aa	Predicted RBP	12.4	□□□□□ -0.42
IRF3-231	ENST00000602190	RNF24	Q9Y225	148 aa		12.4	□□□□□ -0.42
IRF3-231	ENST00000602190	STRAP	Q9Y3F4	350 aa	Known RBP	12.4	□□□□□ -0.42
IRF3-231	ENST00000602190	LINC00854	A0A1B0GVQ3	168 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	NPIPB6	E9PJ23	425 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190		H3BP45	60 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190		K7EP13	123 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	SLC17A3	O00476	420 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	RGS5	O15539	181 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	ZNF324	O75467	553 aa	Predicted RBP	12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	SMR3B	P02814	79 aa	Predicted RBP	12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	OR5G3	P0C626	314 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	CT45A10	P0DMU9	189 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	IL18	Q14116	193 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	PXDC1	Q5TGL8	231 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	TEPP	Q6URK8	271 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	S100A7A	Q86SG5	101 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	SAT2	Q96F10	170 aa	Predicted RBP	12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	ARV1	Q9H2C2	271 aa		12.39	□□□□□ -0.43
IRF3-231	ENST00000602190	SMIM18	P0DKX4	95 aa		12.38	□□□□□ -0.43
IRF3-231	ENST00000602190	IGLC2	P0DOY2	106 aa		12.38	□□□□□ -0.43
IRF3-231	ENST00000602190		Q6ZSN1	163 aa		12.38	□□□□□ -0.43
IRF3-231	ENST00000602190	DIRAS2	Q96HU8	199 aa		12.38	□□□□□ -0.43
IRF3-231	ENST00000602190	TMEM70	Q9BUB7	260 aa		12.38	□□□□□ -0.43
IRF3-231	ENST00000602190	SPINK4	O60575	86 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	IFNA5	P01569	189 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	GCSH	P23434	173 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	ANXA2R	Q3ZCQ2	193 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	LRRC20	Q8TCA0	184 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	ARL6	Q9H0F7	186 aa		12.37	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms