RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 DLK1P80370 383 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 PATE2Q6UY27 113 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 S100A7AQ86SG5 101 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 TMEM256Q8N2U0 113 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 ARL6Q9H0F7 186 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 NPVFQ9HCQ7 196 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 CBY3A6NI87 242 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 SCGB1D2O95969 90 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 OR4E1P0C645 316 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 ANXA7P20073 488 aaKnown RBP9.23□□□□□ -0.93
RPS28-204ENST00000602140 INPP1P49441 399 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 TAS2R60P59551 318 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 SLC38A11Q08AI6 406 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 SPANXN2Q5MJ10 180 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 TMEM14EPQ6UXP3 125 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 OR10P1Q8NGE3 313 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 RPUSD4Q96CM3 377 aaKnown RBP9.23□□□□□ -0.93
RPS28-204ENST00000602140 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 ARV1Q9H2C2 271 aa9.23□□□□□ -0.93
RPS28-204ENST00000602140 NAP1L6A6NFF2 107 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 FNDC10F2Z333 226 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 K7EPK0 472 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
RPS28-204ENST00000602140 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
RPS28-204ENST00000602140 TNP2Q05952 138 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 BAK1Q16611 211 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 ZNRF2Q8NHG8 242 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 C16orf74Q96GX8 76 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 MGAT4CQ9UBM8 478 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 RNF24Q9Y225 148 aa9.22□□□□□ -0.93
RPS28-204ENST00000602140 TIMM8BQ9Y5J9 83 aaPredicted RBP9.22□□□□□ -0.93
RPS28-204ENST00000602140 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 LINC00854A0A1B0GVQ3 168 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 GOSR2O14653 212 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 CDKN1BP46527 198 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 CCL18P55774 89 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 IAH1Q2TAA2 248 aaPredicted RBP9.21□□□□□ -0.94
RPS28-204ENST00000602140 C4orf46Q504U0 113 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 TRIQKQ629K1 86 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 LCN15Q6UWW0 184 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 LINC00305Q7Z4B0 112 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.94
RPS28-204ENST00000602140 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.94
RPS28-204ENST00000602140 GSKIPQ9P0R6 139 aa9.21□□□□□ -0.94
RPS28-204ENST00000602140 MUC4Q99102 2169 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 AGPAT2O15120 278 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 TSC22D2O75157 780 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 CXCL2P19875 107 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 TAS2R30P59541 319 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 PXDC1Q5TGL8 231 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 ZNF546Q86UE3 836 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 ZBTB8BQ8NAP8 495 aaPredicted RBP9.2□□□□□ -0.94
RPS28-204ENST00000602140 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
RPS28-204ENST00000602140 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 RCL1Q9Y2P8 373 aaKnown RBP9.2□□□□□ -0.94
RPS28-204ENST00000602140 LINC00588Q9Y4M8 146 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 RYR1P21817 5038 aa9.2□□□□□ -0.94
RPS28-204ENST00000602140 H3BTX0 84 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 H7BYZ3 331 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 CLINT1Q14677 625 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
RPS28-204ENST00000602140 SLC50A1Q9BRV3 221 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
RPS28-204ENST00000602140 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
RPS28-204ENST00000602140 RBM38Q9H0Z9 239 aaKnown RBP9.19□□□□□ -0.94
RPS28-204ENST00000602140 C7orf66A4D0T2 115 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 C16orf90A8MZG2 172 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 PRAC2D3DTV9 90 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 SLC17A3O00476 420 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 COX7A2P2O60397 106 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 MBPP02686 304 aaPredicted RBP9.18□□□□□ -0.94
RPS28-204ENST00000602140 BTCP35070 178 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 OR5I1Q13606 314 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 MORN5Q5VZ52 161 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 SSX7Q7RTT5 188 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 TMEM37Q8WXS4 190 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 MGST2Q99735 147 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 C20orf144Q9BQM9 153 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 GGACTQ9BVM4 153 aa9.18□□□□□ -0.94
RPS28-204ENST00000602140 HSPG2P98160 4391 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 CENPXA8MT69 81 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 OPCMLQ14982 345 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 CCDC28AQ8IWP9 274 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
RPS28-204ENST00000602140 SDHCQ99643 169 aaPredicted RBP9.17□□□□□ -0.94
RPS28-204ENST00000602140 TRAV26-1A0A087WT03 109 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 H3BQ15 152 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 J3KRW8 73 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 L7N2F9 121 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 CCSO14618 274 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 VAMP2P63027 116 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms