RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 PSG9Q00887 426 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 GUCA2BQ16661 112 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 C11orf52Q96A22 123 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 C17orf77Q96MU5 243 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 CITED2Q99967 270 aaPredicted RBP13.74□□□□□ -0.21
VRK3-225ENST00000601912 SMIM7Q9BQ49 75 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 PARLQ9H300 379 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 SNAPINO95295 136 aa13.73□□□□□ -0.21
VRK3-225ENST00000601912 SLC25A5P05141 298 aaKnown RBP13.73□□□□□ -0.21
VRK3-225ENST00000601912 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
VRK3-225ENST00000601912 SIGLEC15Q6ZMC9 328 aa13.73□□□□□ -0.21
VRK3-225ENST00000601912 AAMDCQ9H7C9 122 aa13.73□□□□□ -0.21
VRK3-225ENST00000601912 SMPXQ9UHP9 88 aa13.73□□□□□ -0.21
VRK3-225ENST00000601912 A0A087X0K7 114 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 A8MWP6 167 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 C5orf17Q8NAS9 161 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 CMTM2Q8TAZ6 248 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 GLMPQ8WWB7 406 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 RHPN1-AS1Q9BWJ2 59 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 ZNF253O75346 499 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 EPDR1Q9UM22 224 aa13.72□□□□□ -0.21
VRK3-225ENST00000601912 HELTA6NFD8 242 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 CHEK1O14757 476 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 SLURP1P55000 103 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 TMEM241Q24JQ0 296 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 EXOC3-AS1Q8N2X6 119 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 TVP23CQ96ET8 276 aa13.71□□□□□ -0.21
VRK3-225ENST00000601912 TMEM213A2RRL7 107 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 M0R036 132 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 SLC17A3O00476 420 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 PEX7O00628 323 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 PEMTQ9UBM1 199 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 NAT8Q9UHE5 227 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 C2CD3Q4AC94 2353 aa13.7□□□□□ -0.22
VRK3-225ENST00000601912 AKR1C3P42330 323 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 PNRC1Q12796 327 aaPredicted RBP13.69□□□□□ -0.22
VRK3-225ENST00000601912 FOXL1Q12952 345 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 HIST2H2BDQ6DRA6 164 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 SLC50A1Q9BRV3 221 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 DERL1Q9BUN8 251 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 SETD2Q9BYW2 2564 aaPredicted RBP13.69□□□□□ -0.22
VRK3-225ENST00000601912 M0QZ24 198 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 CCL24O00175 119 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 RPL35P42766 123 aaKnown RBP13.69□□□□□ -0.22
VRK3-225ENST00000601912 CNN1P51911 297 aaKnown RBP13.69□□□□□ -0.22
VRK3-225ENST00000601912 RPL11P62913 178 aaKnown RBP13.69□□□□□ -0.22
VRK3-225ENST00000601912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 ATG101Q9BSB4 218 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 RPH3ALQ9UNE2 315 aa13.69□□□□□ -0.22
VRK3-225ENST00000601912 CSN1S1P47710 185 aa13.68□□□□□ -0.22
VRK3-225ENST00000601912 GNG5P63218 68 aa13.68□□□□□ -0.22
VRK3-225ENST00000601912 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.68□□□□□ -0.22
VRK3-225ENST00000601912 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
VRK3-225ENST00000601912 ZNF331Q9NQX6 463 aaPredicted RBP13.68□□□□□ -0.22
VRK3-225ENST00000601912 C2orf70A6NJV1 201 aa13.67□□□□□ -0.22
VRK3-225ENST00000601912 TCRAP04437 139 aa13.67□□□□□ -0.22
VRK3-225ENST00000601912 CBLN1P23435 193 aa13.67□□□□□ -0.22
VRK3-225ENST00000601912 OR9G4Q8NGQ1 327 aa13.67□□□□□ -0.22
VRK3-225ENST00000601912 K7EQM0 130 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 FHL3Q13643 280 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 DLX4Q92988 240 aaPredicted RBP13.66□□□□□ -0.22
VRK3-225ENST00000601912 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 C9JCJ5 164 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
VRK3-225ENST00000601912 FOLR2P14207 255 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 TAS2R60P59551 318 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 UBE2G1P62253 170 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 AWAT1Q58HT5 328 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 TCF24Q7RTU0 167 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 ARL6IP6Q8N6S5 226 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 NRN1Q9NPD7 142 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 PRELID1Q9Y255 219 aa13.66□□□□□ -0.22
VRK3-225ENST00000601912 EDN2P20800 178 aa13.65□□□□□ -0.22
VRK3-225ENST00000601912 GNG4P50150 75 aa13.65□□□□□ -0.22
VRK3-225ENST00000601912 RHEBQ15382 184 aa13.65□□□□□ -0.22
VRK3-225ENST00000601912 ATRAIDQ6UW56 229 aa13.65□□□□□ -0.22
VRK3-225ENST00000601912 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
VRK3-225ENST00000601912 SERTM2A0A1B0GWG4 89 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 B4DEV8 164 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 M0R3E3 92 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 ADIRFQ15847 76 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 TMEM183BQ1AE95 376 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 SAMD13Q5VXD3 122 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 FMC1Q96HJ9 113 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 LINC00479Q96M42 142 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 KLF12Q9Y4X4 402 aa13.64□□□□□ -0.23
VRK3-225ENST00000601912 DIRC3C9JPN6 131 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 KRTAP10-3P60369 221 aa13.63□□□□□ -0.23
VRK3-225ENST00000601912 RPL23P62829 140 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms