RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MGAT4CQ9UBM8 478 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 PLAC8L1A1L4L8 177 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 CENPXA8MT69 81 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
SCAF1-204ENST00000601038 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 BTCP35070 178 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 LINC01587Q99440 93 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 SDHCQ99643 169 aaPredicted RBP11.97□□□□□ -0.49
SCAF1-204ENST00000601038 ARV1Q9H2C2 271 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 PPP1R14DQ9NXH3 145 aa11.97□□□□□ -0.49
SCAF1-204ENST00000601038 LINC00854A0A1B0GVQ3 168 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 GOSR2O14653 212 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 SCGB1D2O95969 90 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 CXCL2P19875 107 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 TAS2R60P59551 318 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 SLC38A11Q08AI6 406 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 C1orf134Q5TEV5 83 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 ZBTB8BQ8NAP8 495 aaPredicted RBP11.96□□□□□ -0.49
SCAF1-204ENST00000601038 MITD1Q8WV92 249 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 GGACTQ9BVM4 153 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
SCAF1-204ENST00000601038 RCL1Q9Y2P8 373 aaKnown RBP11.96□□□□□ -0.49
SCAF1-204ENST00000601038 FCN2Q15485 313 aa11.95□□□□□ -0.5
SCAF1-204ENST00000601038 CNPY1Q3B7I2 92 aa11.95□□□□□ -0.5
SCAF1-204ENST00000601038 ZNF546Q86UE3 836 aa11.95□□□□□ -0.5
SCAF1-204ENST00000601038 RPUSD4Q96CM3 377 aaKnown RBP11.95□□□□□ -0.5
SCAF1-204ENST00000601038 C7orf66A4D0T2 115 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 CBY3A6NI87 242 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 F5H768 121 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 AGPAT2O15120 278 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 ATP5G1P05496 136 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 CDKN1BP46527 198 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 ATP5G3P48201 142 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 LCN15Q6UWW0 184 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 LINC00305Q7Z4B0 112 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 SLC50A1Q9BRV3 221 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 ATG101Q9BSB4 218 aa11.94□□□□□ -0.5
SCAF1-204ENST00000601038 ZNF331Q9NQX6 463 aaPredicted RBP11.94□□□□□ -0.5
SCAF1-204ENST00000601038 MBPP02686 304 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-204ENST00000601038 HTN1P15515 57 aa11.93□□□□□ -0.5
SCAF1-204ENST00000601038 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
SCAF1-204ENST00000601038 BPIFA4PQ86YQ2 179 aa11.93□□□□□ -0.5
SCAF1-204ENST00000601038 TIMM8BQ9Y5J9 83 aaPredicted RBP11.93□□□□□ -0.5
SCAF1-204ENST00000601038 PRB4P10163 310 aaPredicted RBP11.92□□□□□ -0.5
SCAF1-204ENST00000601038 IL7P13232 177 aa11.92□□□□□ -0.5
SCAF1-204ENST00000601038 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
SCAF1-204ENST00000601038 C20orf144Q9BQM9 153 aa11.92□□□□□ -0.5
SCAF1-204ENST00000601038 MUC4Q99102 2169 aa11.92□□□□□ -0.5
SCAF1-204ENST00000601038 H7BYZ3 331 aa11.91□□□□□ -0.5
SCAF1-204ENST00000601038 COX7A2P2O60397 106 aa11.91□□□□□ -0.5
SCAF1-204ENST00000601038 NUDT3O95989 172 aa11.91□□□□□ -0.5
SCAF1-204ENST00000601038 RNASE8Q8TDE3 154 aaKnown RBP11.91□□□□□ -0.5
SCAF1-204ENST00000601038 TMEM263Q8WUH6 116 aaKnown RBP11.91□□□□□ -0.5
SCAF1-204ENST00000601038 MGST2Q99735 147 aa11.91□□□□□ -0.5
SCAF1-204ENST00000601038 FAT2Q9NYQ8 4349 aa11.91□□□□□ -0.5
SCAF1-204ENST00000601038 L7N2F9 121 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 SNRPCP09234 159 aaKnown RBP11.9□□□□□ -0.5
SCAF1-204ENST00000601038 CCL18P55774 89 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 VAMP2P63027 116 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 ZNF846Q147U1 533 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 C10orf113Q5VZT2 155 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 DNAJC4Q9NNZ3 241 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 NOP10Q9NPE3 64 aaKnown RBP11.9□□□□□ -0.5
SCAF1-204ENST00000601038 DNAH2Q9P225 4427 aa11.9□□□□□ -0.5
SCAF1-204ENST00000601038 PCLOQ9Y6V0 5065 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 PLA2G10O15496 165 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 IGLC2P0DOY2 106 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 RAB31Q13636 194 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 KIR3DS1Q14943 382 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 OPCMLQ14982 345 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 Q6ZRG5 221 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 C20orf85Q9H1P6 137 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
SCAF1-204ENST00000601038 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 SLC17A3O00476 420 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 CCSO14618 274 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 CAMLGP49069 296 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 RNF141Q8WVD5 230 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-204ENST00000601038 LSM5Q9Y4Y9 91 aaKnown RBP11.88□□□□□ -0.51
SCAF1-204ENST00000601038 DNAH17Q9UFH2 4485 aa11.88□□□□□ -0.51
SCAF1-204ENST00000601038 H3BQ15 152 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 H3BTX0 84 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 LYRM1O43325 122 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 TCRBP04435 133 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 BCAP31P51572 246 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 GUK1Q16774 197 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 NRARPQ7Z6K4 114 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 ZNF575Q86XF7 245 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 PARD6GQ9BYG4 376 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms