RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 KLF12Q9Y4X4 402 aa15.46■□□□□ 0.06
PNKP-214ENST00000600573 DNAJC9-AS1A6NH13 148 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 TCRAP04437 139 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 MGST1P10620 155 aaKnown RBP15.45■□□□□ 0.06
PNKP-214ENST00000600573 ERVFC1-1P60608 527 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 TMEM95Q3KNT9 176 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 OR8I2Q8N0Y5 310 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 ARL6IP6Q8N6S5 226 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 CMTM2Q8TAZ6 248 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 ZNF418Q8TF45 676 aaPredicted RBP15.45■□□□□ 0.06
PNKP-214ENST00000600573 CCDC168Q8NDH2 2452 aa15.45■□□□□ 0.06
PNKP-214ENST00000600573 ZNF469Q96JG9 3925 aaPredicted RBP15.45■□□□□ 0.06
PNKP-214ENST00000600573 TRAV9-1A0A075B6T8 112 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 PPP5D1E7EU14 171 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 ISLRO14498 428 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 BUB3O43684 328 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 ZNF253O75346 499 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 S100A6P06703 90 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 MEOX2P50222 304 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 PSG9Q00887 426 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 FOXL1Q12952 345 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 OR5I1Q13606 314 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 BAGE2Q86Y30 109 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 MYOZ3Q8TDC0 251 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 LINC00479Q96M42 142 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 IL36BQ9NZH7 164 aa15.44■□□□□ 0.06
PNKP-214ENST00000600573 TRAV34A0A0B4J273 112 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 TYMSP04818 313 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 SRD5A1P18405 259 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 UBE2E2Q96LR5 201 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 SAV1Q9H4B6 383 aaPredicted RBP15.43■□□□□ 0.06
PNKP-214ENST00000600573 U3KQE9 123 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 SIGLEC15Q6ZMC9 328 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 JMJD8Q96S16 334 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 V9GYV3 84 aa15.43■□□□□ 0.06
PNKP-214ENST00000600573 IGHV3-35A0A0C4DH35 117 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 CLPSL1A2RUU4 121 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 IGHV3-11P01762 117 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 FAM3BP58499 235 aaPredicted RBP15.42■□□□□ 0.06
PNKP-214ENST00000600573 FAM106AQ4KMX7 169 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 GPHB5Q86YW7 130 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 EXOC3-AS1Q8N2X6 119 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 SERTAD4Q9NUC0 356 aa15.42■□□□□ 0.06
PNKP-214ENST00000600573 A0A1W2PS18 150 aa15.41■□□□□ 0.06
PNKP-214ENST00000600573 TRGC2P03986 189 aa15.41■□□□□ 0.06
PNKP-214ENST00000600573 RNASE1P07998 156 aaKnown RBP15.41■□□□□ 0.06
PNKP-214ENST00000600573 RPEL1Q2QD12 228 aa15.41■□□□□ 0.06
PNKP-214ENST00000600573 AAMDCQ9H7C9 122 aa15.41■□□□□ 0.06
PNKP-214ENST00000600573 A0A087X0K7 114 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 TRBV6-1A0A0K0K1D8 114 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 FAM181BA6NEQ2 426 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 K7EMT4 169 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 SLC17A3O00476 420 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 LY6G6DO95868 133 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 IBA57Q5T440 356 aaKnown RBP15.4■□□□□ 0.06
PNKP-214ENST00000600573 FAM231DQ6ZW35 169 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 Q86TA4 180 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 NHLRC2Q8NBF2 726 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 GRAMD2BQ96HH9 432 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 C17orf77Q96MU5 243 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 DUX5Q96PT3 197 aa15.4■□□□□ 0.06
PNKP-214ENST00000600573 RNASE7Q9H1E1 156 aaKnown RBP15.4■□□□□ 0.06
PNKP-214ENST00000600573 SERTM2A0A1B0GWG4 89 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 WFDC12Q8WWY7 111 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 K7EQM0 130 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 LTAP01374 205 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 LGALS1P09382 135 aaKnown RBP15.39■□□□□ 0.05
PNKP-214ENST00000600573 Q6ZSV7 163 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 GOLT1AQ6ZVE7 132 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 CLEC5AQ9NY25 188 aa15.39■□□□□ 0.05
PNKP-214ENST00000600573 FLNAP21333 2647 aaKnown RBP15.38■□□□□ 0.05
PNKP-214ENST00000600573 ZNF320A2RRD8 509 aa15.38■□□□□ 0.05
PNKP-214ENST00000600573 TRBV12-3P01733 135 aa15.38■□□□□ 0.05
PNKP-214ENST00000600573 RPLP1P05386 114 aaKnown RBP15.38■□□□□ 0.05
PNKP-214ENST00000600573 HILS1P60008 231 aa15.38■□□□□ 0.05
PNKP-214ENST00000600573 TMEM75Q8N9X5 138 aa15.38■□□□□ 0.05
PNKP-214ENST00000600573 ZFHX3Q15911 3703 aa15.38■□□□□ 0.05
PNKP-214ENST00000600573 IGHV3OR16-8A0A075B7F1 116 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 C5orf52A6NGY3 159 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 ZNF785A8K8V0 405 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 BMI1P35226 326 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 CSN1S1P47710 185 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 SNRPEP62304 92 aaKnown RBP15.37■□□□□ 0.05
PNKP-214ENST00000600573 C16orf54Q6UWD8 224 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 LCNL1Q6ZST4 164 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 KLHDC1Q8N7A1 406 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 C16orf95Q9H693 158 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 ESM1Q9NQ30 184 aa15.37■□□□□ 0.05
PNKP-214ENST00000600573 FBLL1A6NHQ2 334 aaKnown RBP15.36■□□□□ 0.05
PNKP-214ENST00000600573 GATCO43716 136 aaKnown RBP15.36■□□□□ 0.05
PNKP-214ENST00000600573 SLC50A1Q9BRV3 221 aa15.36■□□□□ 0.05
PNKP-214ENST00000600573 UFC1Q9Y3C8 167 aa15.36■□□□□ 0.05
PNKP-214ENST00000600573 NOTCH2Q04721 2471 aa15.36■□□□□ 0.05
PNKP-214ENST00000600573 ZNF705GA8MUZ8 300 aaPredicted RBP15.35■□□□□ 0.05
PNKP-214ENST00000600573 UBE2CO00762 179 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 PHOX2AO14813 284 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BKO60814 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BJP06899 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BOP23527 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BBP33778 126 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms