RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 FUT9Q9Y231 359 aa10.15□□□□□ -0.78
SNRPA-208ENST00000600456 HMSDA8MTL9 139 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 SMLR1H3BR10 107 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 ZNF253O75346 499 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 NUTF2P61970 127 aaKnown RBP10.14□□□□□ -0.79
SNRPA-208ENST00000600456 RHOBP62745 196 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 ZNF345Q14585 488 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 ACOT6Q3I5F7 207 aaPredicted RBP10.14□□□□□ -0.79
SNRPA-208ENST00000600456 RNF183Q96D59 192 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 RETNQ9HD89 108 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 NBEAL2Q6ZNJ1 2754 aa10.14□□□□□ -0.79
SNRPA-208ENST00000600456 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
SNRPA-208ENST00000600456 A0A0J9YX75 114 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 H3BQ15 152 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 SPRY2O43597 315 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 JTBO76095 146 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 CA1P00915 261 aaPredicted RBP10.13□□□□□ -0.79
SNRPA-208ENST00000600456 HIST1H1EP10412 219 aaKnown RBP10.13□□□□□ -0.79
SNRPA-208ENST00000600456 M6PRP20645 277 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 ATP6V0CP27449 155 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 TAS2R45P59539 299 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 SERF2P84101 59 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 PDE6HQ13956 83 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 PSG3Q16557 428 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 HSD17B11Q8NBQ5 300 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 ZNF738Q8NE65 137 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 GNPNAT1Q96EK6 184 aaPredicted RBP10.13□□□□□ -0.79
SNRPA-208ENST00000600456 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 WWC2-AS2Q96NR7 200 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 OVOL2Q9BRP0 275 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 SLC25A2Q9BXI2 301 aa10.13□□□□□ -0.79
SNRPA-208ENST00000600456 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 TRBV19A0A075B6N1 114 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 DUSP14O95147 198 aaKnown RBP10.12□□□□□ -0.79
SNRPA-208ENST00000600456 MBP02144 154 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 RPL7L1Q6DKI1 246 aaKnown RBP10.12□□□□□ -0.79
SNRPA-208ENST00000600456 TCTE3Q8IZS6 198 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 KCNRGQ8N5I3 272 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 SAT2Q96F10 170 aaPredicted RBP10.12□□□□□ -0.79
SNRPA-208ENST00000600456 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 ZNF586Q9NXT0 402 aa10.12□□□□□ -0.79
SNRPA-208ENST00000600456 A0A0D9SG52 128 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 A8MTW9 85 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 SLC17A3O00476 420 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
SNRPA-208ENST00000600456 PYYP10082 97 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 DEFB1P60022 68 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 PSG9Q00887 426 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 KHDC3LQ587J8 217 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 OR11H4Q8NGC9 324 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 OR10G4Q8NGN3 311 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 OR10G9Q8NGN4 311 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 OR10G7Q8NGN6 311 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 ST6GAL2Q96JF0 529 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 PAXXQ9BUH6 204 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 OR51M1Q9H341 326 aa10.11□□□□□ -0.79
SNRPA-208ENST00000600456 A0A1W2PPV4 95 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 F6UB75 175 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 H3BTX0 84 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 SNRPCP09234 159 aaKnown RBP10.1□□□□□ -0.79
SNRPA-208ENST00000600456 C4BPBP20851 252 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 RAB2AP61019 212 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 OR4B1Q8NGF8 309 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
SNRPA-208ENST00000600456 MRPL53Q96EL3 112 aaKnown RBP10.1□□□□□ -0.79
SNRPA-208ENST00000600456 ARPC5LQ9BPX5 153 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
SNRPA-208ENST00000600456 OR7C2O60412 319 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 NDUFB4O95168 129 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 HLA-DMBP28068 263 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 CNN1P51911 297 aaKnown RBP10.09□□□□□ -0.79
SNRPA-208ENST00000600456 OR8A1Q8NGG7 326 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 RNF141Q8WVD5 230 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 SH3BGRL3Q9H299 93 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 EDA2RQ9HAV5 297 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 PRELID1Q9Y255 219 aa10.09□□□□□ -0.79
SNRPA-208ENST00000600456 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 AMBPP02760 352 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 UBE2L3P68036 154 aaKnown RBP10.08□□□□□ -0.8
SNRPA-208ENST00000600456 FAM122CQ6P4D5 195 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 AKAP14Q86UN6 197 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 AAMDCQ9H7C9 122 aa10.08□□□□□ -0.8
SNRPA-208ENST00000600456 hCG_2014768A0A024R1R8 64 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 KANTRA0A1W2PQU2 76 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 BCL2L11O43521 198 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 OR10J4P0C629 311 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 CDC34P49427 236 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-208ENST00000600456 HIST1H1AQ02539 215 aaPredicted RBP10.07□□□□□ -0.8
SNRPA-208ENST00000600456 AMTNQ6UX39 209 aa10.07□□□□□ -0.8
SNRPA-208ENST00000600456 LYPD1Q8N2G4 141 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms