RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 COL8A1P27658 744 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 PDLIM4P50479 330 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 C5orf64Q2M2E5 130 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 ARPC1AQ92747 370 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGF2BP2-AS1Q96M15 143 aa9.13□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZNF138P52744 262 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 FBXL19-AS1Q494R0 122 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 OR4F17Q8NGA8 305 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 A0A1W2PS18 150 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 PRTN3P24158 256 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 SLAQ13239 276 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 NEU4Q8WWR8 484 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 SONP18583 2426 aaKnown RBP9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 KIR2DL5BA0A0G2JN68 375 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 KIR2DL5BA0A0G2JPC4 375 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 HSBP1L1C9JCN9 74 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 K7EIM0 57 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 CCL25O15444 150 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZNF324O75467 553 aaPredicted RBP9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 CRYGBP07316 175 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 WDR73Q6P4I2 378 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 BRD3OSQ6XYD6 125 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 KIR2DL5AQ8N109 375 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 RNF125Q96EQ8 232 aa9.12□□□□□ -0.95
ARHGEF1-220ENST00000600274 I3L2K1 104 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 NAV2Q8IVL1 2488 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 CSMD2Q7Z408 3487 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 GPR183P32249 361 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 TCRAP04437 139 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 GPR82Q96P67 336 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
ARHGEF1-220ENST00000600274 CHEK1O14757 476 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 NDUFB8O95169 186 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 GP9P14770 177 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZFHX3Q15911 3703 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 G3V318 75 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 BMPR1BO00238 502 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 CRYGCP07315 174 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 SAA4P35542 130 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 LY6EQ16553 131 aa9.1□□□□□ -0.95
ARHGEF1-220ENST00000600274 LY6LH3BQJ8 138 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 NUDT3O95989 172 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZNF738Q8NE65 137 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 CFHR4Q92496 578 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 C21orf62Q9NYP8 219 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 DOPEY1Q5JWR5 2465 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 ZANQ9Y493 2812 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 hDV102S1A0JD36 115 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 LINC00310P59036 64 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 C11orf71Q6IPW1 123 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 LY6G5BQ8NDX9 201 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 IZUMO1RA6ND01 250 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 MFAP4P55083 255 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 AP1S3Q96PC3 154 aa9.09□□□□□ -0.95
ARHGEF1-220ENST00000600274 IGKV3-7A0A075B6H7 116 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 FSTL3O95633 263 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 OR11H6Q8NGC7 330 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 NRGNQ92686 78 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 LINC01548A6NM66 108 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 HLA-DMBP28068 263 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 Q8TAT8 98 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 GRAMD2BQ96HH9 432 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGKV2-40A0A087WW87 121 aaPredicted RBP9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGKV2D-40P01614 121 aaPredicted RBP9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGLC2P0DOY2 106 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGLC3P0DOY3 106 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 ZNF491Q8N8L2 437 aa9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 SOX21Q9Y651 276 aaPredicted RBP9.08□□□□□ -0.96
ARHGEF1-220ENST00000600274 M0R1W7 72 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 FAM106CPP0CH98 169 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 MPV17L2Q567V2 206 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 GDF5OSQ5U4N7 250 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 ITLN2Q8WWU7 325 aaPredicted RBP9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 CHRDL1Q9BU40 450 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 RPP21Q9H633 154 aaKnown RBP9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 MT-ND6P03923 174 aa9.07□□□□□ -0.96
ARHGEF1-220ENST00000600274 FXYD7P58549 80 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms