RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 CCDC140Q96MF4 163 aa10.26□□□□□ -0.77
IRF3-225ENST00000600022 TXNDC17Q9BRA2 123 aa10.26□□□□□ -0.77
IRF3-225ENST00000600022 SLC35B3Q9H1N7 401 aa10.26□□□□□ -0.77
IRF3-225ENST00000600022 LOC102723971A0A1B0GUV8 181 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 OR2T8A6NH00 312 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 SFTA3P0C7M3 94 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
IRF3-225ENST00000600022 MIR17HGQ75NE6 70 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 SUN5Q8TC36 379 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 RXFP4Q8TDU9 374 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 SRD5A3Q9H8P0 318 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 SEPSECSQ9HD40 501 aaKnown RBP10.25□□□□□ -0.77
IRF3-225ENST00000600022 S4R3C0 116 aa10.25□□□□□ -0.77
IRF3-225ENST00000600022 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 NDUFS6O75380 124 aaKnown RBP10.24□□□□□ -0.77
IRF3-225ENST00000600022 OR2C1O95371 312 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 IGKV1-17P01599 117 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 IGHV3-23P01764 117 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 FOLR2P14207 255 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 GCHFRP30047 84 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 GPR183P32249 361 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
IRF3-225ENST00000600022 GUCA2BQ16661 112 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 ZNF600Q6ZNG1 722 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 TMEM37Q8WXS4 190 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 LINC00052Q96N35 136 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 SEC11CQ9BY50 192 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 KMT2AQ03164 3969 aa10.24□□□□□ -0.77
IRF3-225ENST00000600022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.23□□□□□ -0.77
IRF3-225ENST00000600022 C2orf70A6NJV1 201 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 APOC3P02656 99 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 IL4P05112 153 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
IRF3-225ENST00000600022 ICAM4Q14773 271 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 RNF125Q96EQ8 232 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 UHRF2Q96PU4 802 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 RARRES2Q99969 163 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 PEMTQ9UBM1 199 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 ARL2-SNX15V9GYD0 113 aa10.23□□□□□ -0.77
IRF3-225ENST00000600022 TGOLN2O43493 480 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 PDE6DO43924 150 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 EIF3GO75821 320 aaKnown RBP eCLIP10.22□□□□□ -0.77
IRF3-225ENST00000600022 CLEC3BP05452 202 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 CEBPGP53567 150 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 UBE2L3P68036 154 aaKnown RBP10.22□□□□□ -0.77
IRF3-225ENST00000600022 CLEC19AQ6UXS0 136 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 SVBPQ8N300 66 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 PAXXQ9BUH6 204 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 NKX6-2Q9C056 277 aaPredicted RBP10.22□□□□□ -0.77
IRF3-225ENST00000600022 OR51M1Q9H341 326 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 TMPRSS5Q9H3S3 457 aa10.22□□□□□ -0.77
IRF3-225ENST00000600022 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 F6UZH7 168 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 PAGE4O60829 102 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 CTSGP08311 255 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 ADMP35318 185 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 PATE2Q6UY27 113 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 CCDC28AQ8IWP9 274 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 OR2K2Q8NGT1 345 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 DYNLRB2Q8TF09 96 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 OVOL2Q9BRP0 275 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 RABAC1Q9UI14 185 aa10.21□□□□□ -0.77
IRF3-225ENST00000600022 TMEM250H0YL14 139 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 SNAPINO95295 136 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
IRF3-225ENST00000600022 CBLN1P23435 193 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 ARL3P36405 182 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 UBE2G2P60604 165 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 IL17DQ8TAD2 202 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 LINC00476Q8WZB0 136 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 ZNF414Q96IQ9 312 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 SCRT1Q9BWW7 348 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 SLC25A2Q9BXI2 301 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
IRF3-225ENST00000600022 MLXQ9UH92 298 aa10.2□□□□□ -0.78
IRF3-225ENST00000600022 CARHSP1Q9Y2V2 147 aaKnown RBP10.2□□□□□ -0.78
IRF3-225ENST00000600022 PUS1Q9Y606 427 aaKnown RBP eCLIP10.2□□□□□ -0.78
IRF3-225ENST00000600022 LY6G6CO95867 125 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 FAM74A3Q4VXF1 159 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 TMEM190Q8WZ59 177 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 CHRDL1Q9BU40 450 aa10.19□□□□□ -0.78
IRF3-225ENST00000600022 MRPL27Q9P0M9 148 aaKnown RBP10.19□□□□□ -0.78
IRF3-225ENST00000600022 HERC2O95714 4834 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 TRAV5A0A0B4J249 113 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 A0A1W2PRE2 83 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 TMEM213A2RRL7 107 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 GGCTO75223 188 aaKnown RBP10.18□□□□□ -0.78
IRF3-225ENST00000600022 OR10J4P0C629 311 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 TM4SF20Q53R12 229 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 C10orf91Q5T1B1 145 aa10.18□□□□□ -0.78
IRF3-225ENST00000600022 CYB561D1Q8N8Q1 229 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms