RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 F6UB75 175 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 HBE1P02100 147 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 PSG3Q16557 428 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 GUK1Q16774 197 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 MIC13Q5XKP0 118 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 PATE2Q6UY27 113 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 C2CD4CQ8TF44 421 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 NEU1Q99519 415 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 SLC39A9Q9NUM3 307 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 X6R8D5 127 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 AGRNO00468 2067 aa10.26□□□□□ -0.77
LIG1-218ENST00000599322 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 LY6G6CO95867 125 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 TCTAP57738 103 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 DEFB1P60022 68 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 CHAC2Q8WUX2 184 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 PXMP4Q9Y6I8 212 aa10.25□□□□□ -0.77
LIG1-218ENST00000599322 TRAV10A0A0B4J240 114 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
LIG1-218ENST00000599322 RBMY1CP0DJD4 496 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 CXCL3P19876 107 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
LIG1-218ENST00000599322 PRR20EP86478 221 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 PRR20CP86479 221 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 PRR20DP86480 221 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 PRR20BP86481 221 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 PRR20AP86496 221 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
LIG1-218ENST00000599322 NHLH2Q02577 135 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 OPCMLQ14982 345 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
LIG1-218ENST00000599322 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 RNF182Q8N6D2 247 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 PPP1R1CQ8WVI7 109 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 TMEM37Q8WXS4 190 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
LIG1-218ENST00000599322 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 PTTG1O95997 202 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 INSP01308 110 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 IFNA5P01569 189 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 EMP1P54849 157 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 CLINT1Q14677 625 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 ZNF705AQ6ZN79 300 aaPredicted RBP10.23□□□□□ -0.77
LIG1-218ENST00000599322 OR8A1Q8NGG7 326 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 SCGB1C1Q8TD33 95 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 RPUSD4Q96CM3 377 aaKnown RBP10.23□□□□□ -0.77
LIG1-218ENST00000599322 OR5AC2Q9NZP5 309 aa10.23□□□□□ -0.77
LIG1-218ENST00000599322 TSPOP30536 169 aa10.22□□□□□ -0.77
LIG1-218ENST00000599322 THAP6Q8TBB0 222 aa10.22□□□□□ -0.77
LIG1-218ENST00000599322 NPCDR1Q9BY65 106 aa10.22□□□□□ -0.77
LIG1-218ENST00000599322 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
LIG1-218ENST00000599322 TIMM9Q9Y5J7 89 aa10.22□□□□□ -0.77
LIG1-218ENST00000599322 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.77
LIG1-218ENST00000599322 IGLL5B9A064 214 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 BOLA2-SMG1P6H3BVE0 249 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 MPC2O95563 127 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.77
LIG1-218ENST00000599322 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.77
LIG1-218ENST00000599322 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 OR11H7Q8NGC8 314 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 LINC00476Q8WZB0 136 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 MED28Q9H204 178 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 AAMDCQ9H7C9 122 aa10.21□□□□□ -0.77
LIG1-218ENST00000599322 LOC102723971A0A1B0GUV8 181 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 MRPS12O15235 138 aaKnown RBP10.2□□□□□ -0.78
LIG1-218ENST00000599322 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
LIG1-218ENST00000599322 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
LIG1-218ENST00000599322 H2BFSP57053 126 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 C17orf77Q96MU5 243 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 ATP5SQ99766 215 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 WDR61Q9GZS3 305 aaKnown RBP10.2□□□□□ -0.78
LIG1-218ENST00000599322 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
LIG1-218ENST00000599322 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 A8MTW9 85 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 H0YIZ8 118 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 M0R2Z0 102 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 ZNF253O75346 499 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
LIG1-218ENST00000599322 Q6ZTC4 211 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 LINC01587Q99440 93 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
LIG1-218ENST00000599322 TMEM14CQ9P0S9 112 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
LIG1-218ENST00000599322 DEFB131BA0A096LNP1 70 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 H3BTX0 84 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 CDKN1BP46527 198 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 AMTNQ6UX39 209 aa10.18□□□□□ -0.78
LIG1-218ENST00000599322 C1orf158Q8N1D5 194 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms