RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 UHRF2Q96PU4 802 aa10.26□□□□□ -0.77
SHKBP1-218ENST00000598907 RNF2Q99496 336 aa10.26□□□□□ -0.77
SHKBP1-218ENST00000598907 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
SHKBP1-218ENST00000598907 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-218ENST00000598907 TECRQ9NZ01 308 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-218ENST00000598907 ZNF98A6NK75 572 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 SULT1A2P50226 295 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 AKR1C8PQ5T2L2 129 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 MORN5Q5VZ52 161 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 OR2K2Q8NGT1 345 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 MRPL32Q9BYC8 188 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
SHKBP1-218ENST00000598907 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 CHEK1O14757 476 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 FOLR2P14207 255 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 S100A7P31151 101 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 RAB5CP51148 216 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 RHOBP62745 196 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 IFITM2Q01629 132 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 ZNF726P1Q15940 193 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 ALKAL2Q6UX46 152 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 S100A7AQ86SG5 101 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 RHPN1-AS1Q9BWJ2 59 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 SCRT1Q9BWW7 348 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
SHKBP1-218ENST00000598907 UBR4Q5T4S7 5183 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 TRAV5A0A0B4J249 113 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 A0A1W2PS18 150 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 SPRY2O43597 315 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 BMI1P35226 326 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 FAM122CQ6P4D5 195 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 MIR17HGQ75NE6 70 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 SSX7Q7RTT5 188 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 ZNF680Q8NEM1 530 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 ACTR3CQ9C0K3 210 aaPredicted RBP10.23□□□□□ -0.77
SHKBP1-218ENST00000598907 IGHV3-49A0A0A0MS15 119 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 A0A1W2PPV4 95 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 CDC34P49427 236 aaPredicted RBP10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 FHITP49789 147 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 FAM74A1Q5RGS3 127 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 MBD3L1Q8WWY6 194 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 RAB24Q969Q5 203 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 MLXQ9UH92 298 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 RNF24Q9Y225 148 aa10.22□□□□□ -0.77
SHKBP1-218ENST00000598907 IGHV3OR16-13A0A075B7E8 117 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 IGHV3-74A0A0B4J1X5 117 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 CTXND1A0A1B0GTU2 59 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 STAG3L2P0CL84 134 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 STAG3L3P0CL85 134 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 DEFB114Q30KQ6 69 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 RNF141Q8WVD5 230 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 ZNF503Q96F45 646 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 GRAMD2BQ96HH9 432 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 C17orf77Q96MU5 243 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 GPR82Q96P67 336 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.77
SHKBP1-218ENST00000598907 RTL8CO15255 209 aa10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 IFNA7P01567 189 aa10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 ATF4P18848 351 aaPredicted RBP10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 OR8I2Q8N0Y5 310 aa10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 FAM213BQ8TBF2 198 aa10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
SHKBP1-218ENST00000598907 EIF3GO75821 320 aaKnown RBP eCLIP10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 CD5P06127 495 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 RPL7P18124 248 aaKnown RBP10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 TAS2R45P59539 299 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 KHDC3LQ587J8 217 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 STXBP6Q8NFX7 210 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 SUN5Q8TC36 379 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 SAT2Q96F10 170 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 UBQLN2Q9UHD9 624 aa10.19□□□□□ -0.78
SHKBP1-218ENST00000598907 A0A087X0K7 114 aa10.18□□□□□ -0.78
SHKBP1-218ENST00000598907 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
SHKBP1-218ENST00000598907 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
SHKBP1-218ENST00000598907 IGLL5B9A064 214 aa10.18□□□□□ -0.78
SHKBP1-218ENST00000598907 M0R2N4 97 aa10.18□□□□□ -0.78
SHKBP1-218ENST00000598907 HMGB3O15347 200 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms