RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RARRES2Q99969 163 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 WFDC1Q9HC57 220 aa12.81□□□□□ -0.36
USHBP1-209ENST00000598570 H3BQ15 152 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 FGL1Q08830 312 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 CLINT1Q14677 625 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 GUK1Q16774 197 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-209ENST00000598570 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 KCNIP2Q9NS61 270 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 X6R8D5 127 aa12.8□□□□□ -0.36
USHBP1-209ENST00000598570 TRAV5A0A0B4J249 113 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 A0A0J9YWU9 116 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 G3V3Q6 166 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 PSG3Q16557 428 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 Q8NAQ8 132 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 NEU1Q99519 415 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 SLC50A1Q9BRV3 221 aa12.79□□□□□ -0.36
USHBP1-209ENST00000598570 F6UB75 175 aa12.78□□□□□ -0.36
USHBP1-209ENST00000598570 PSG9Q00887 426 aa12.78□□□□□ -0.36
USHBP1-209ENST00000598570 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
USHBP1-209ENST00000598570 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
USHBP1-209ENST00000598570 EBLN2Q6P2I7 272 aa12.78□□□□□ -0.36
USHBP1-209ENST00000598570 ZNF705FA8MVS1 300 aaPredicted RBP12.77□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
USHBP1-209ENST00000598570 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.37
USHBP1-209ENST00000598570 RNF182Q8N6D2 247 aa12.77□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
USHBP1-209ENST00000598570 TRBV19A0A075B6N1 114 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 C17orf112F2Z3M2 114 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
USHBP1-209ENST00000598570 NDUFB4O95168 129 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 HIST1H1EP10412 219 aaKnown RBP12.76□□□□□ -0.37
USHBP1-209ENST00000598570 MIFP14174 115 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 PDE6HQ13956 83 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 SLC25A2Q9BXI2 301 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
USHBP1-209ENST00000598570 TIMM9Q9Y5J7 89 aa12.76□□□□□ -0.37
USHBP1-209ENST00000598570 SLC17A3O00476 420 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 IFNA5P01569 189 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
USHBP1-209ENST00000598570 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
USHBP1-209ENST00000598570 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
USHBP1-209ENST00000598570 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
USHBP1-209ENST00000598570 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
USHBP1-209ENST00000598570 RNF222A6NCQ9 220 aa12.74□□□□□ -0.37
USHBP1-209ENST00000598570 SMIM9A6NGZ8 99 aa12.74□□□□□ -0.37
USHBP1-209ENST00000598570 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
USHBP1-209ENST00000598570 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
USHBP1-209ENST00000598570 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
USHBP1-209ENST00000598570 LYSTQ99698 3801 aa12.74□□□□□ -0.37
USHBP1-209ENST00000598570 CRXO43186 299 aaPredicted RBP12.73□□□□□ -0.37
USHBP1-209ENST00000598570 AMBPP02760 352 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 C1orf158Q8N1D5 194 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 OR2G3Q8NGZ4 309 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 SCGB1C1Q8TD33 95 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
USHBP1-209ENST00000598570 SMIM3Q9BZL3 60 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 SLC35B3Q9H1N7 401 aa12.73□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 OR4B1Q8NGF8 309 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF503Q96F45 646 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 IGF2BP2-AS1Q96M15 143 aa12.72□□□□□ -0.37
USHBP1-209ENST00000598570 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 ZNF266Q14584 549 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 PSMG3Q9BT73 122 aaPredicted RBP12.71□□□□□ -0.37
USHBP1-209ENST00000598570 PRELID1Q9Y255 219 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 RFNGQ9Y644 331 aa12.71□□□□□ -0.37
USHBP1-209ENST00000598570 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 PYYP10082 97 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 FFAR4Q5NUL3 377 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 ODF3Q96PU9 254 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 MFFQ9GZY8 342 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 OR51M1Q9H341 326 aa12.7□□□□□ -0.38
USHBP1-209ENST00000598570 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
USHBP1-209ENST00000598570 NPIPB6E9PJ23 425 aa12.69□□□□□ -0.38
USHBP1-209ENST00000598570 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
USHBP1-209ENST00000598570 M6PRP20645 277 aa12.69□□□□□ -0.38
USHBP1-209ENST00000598570 RHOBP62745 196 aa12.69□□□□□ -0.38
USHBP1-209ENST00000598570 SERF2P84101 59 aa12.69□□□□□ -0.38
USHBP1-209ENST00000598570 RYR3Q15413 4870 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 H3BTX0 84 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 BOLA2-SMG1P6H3BVE0 249 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 CEMP1Q6PRD7 247 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-209ENST00000598570 LYPD1Q8N2G4 141 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 INO80EQ8NBZ0 244 aaPredicted RBP12.68□□□□□ -0.38
USHBP1-209ENST00000598570 SUN5Q8TC36 379 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms