RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 ZNF705BP0CI00 300 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 Q6ZWC4 215 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 S100A7AQ86SG5 101 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 HSD17B11Q8NBQ5 300 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 INO80EQ8NBZ0 244 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 RNF183Q96D59 192 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 ZNF503Q96F45 646 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 EDA2RQ9HAV5 297 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 ZNF331Q9NQX6 463 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
SHKBP1-217ENST00000598558 A0A1B0GVG6 124 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 ZNF705FA8MVS1 300 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 PRAC2D3DTV9 90 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 SPRY2O43597 315 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 NDUFB4O95168 129 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 CA1P00915 261 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 ATP6V0CP27449 155 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 PSG3Q16557 428 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 SH3BGRL3Q9H299 93 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
SHKBP1-217ENST00000598558 hCG_2014768A0A024R1R8 64 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 CXCL2P19875 107 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 FXYD7P58549 80 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 RAB2AP61019 212 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 MFFQ9GZY8 342 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 RPRMQ9NS64 109 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 TIMM9Q9Y5J7 89 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
SHKBP1-217ENST00000598558 AGRNO00468 2067 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 A8MTW9 85 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 SAMD13Q5VXD3 122 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 OR4B1Q8NGF8 309 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 LRRC20Q8TCA0 184 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 WWC2-AS2Q96NR7 200 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 KCNIP2Q9NS61 270 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 RNF24Q9Y225 148 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 TP53TG1Q9Y2A0 90 aa10.35□□□□□ -0.75
SHKBP1-217ENST00000598558 OR10J4P0C629 311 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 CD300CQ08708 224 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 ZNF266Q14584 549 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 KCNRGQ8N5I3 272 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 RPP25LQ8N5L8 163 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 MRPL32Q9BYC8 188 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
SHKBP1-217ENST00000598558 HMSDA8MTL9 139 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 SPP1P10451 314 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 M6PRP20645 277 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 CNN1P51911 297 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 EBLN2Q6P2I7 272 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 FAM122CQ6P4D5 195 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 MORN3Q6PF18 240 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 OR8A1Q8NGG7 326 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 OR2G3Q8NGZ4 309 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 BLNKQ8WV28 456 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 RNF141Q8WVD5 230 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 XCL2Q9UBD3 114 aa10.33□□□□□ -0.76
SHKBP1-217ENST00000598558 M0R3E3 92 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 HMGB3O15347 200 aaKnown RBP10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 NBEAP1P0C6P0 100 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 RHOBP62745 196 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 GUK1Q16774 197 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 ACOT6Q3I5F7 207 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 OR10G4Q8NGN3 311 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 OR10G9Q8NGN4 311 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 OR10G7Q8NGN6 311 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
SHKBP1-217ENST00000598558 ZNF253O75346 499 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 PSG9Q00887 426 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 TCTE3Q8IZS6 198 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 PHYHIPLQ96FC7 376 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 RARRES2Q99969 163 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 X6R8D5 127 aa10.31□□□□□ -0.76
SHKBP1-217ENST00000598558 BORCS7-ASMTA0A0B4J1R7 106 aa10.3□□□□□ -0.76
SHKBP1-217ENST00000598558 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
SHKBP1-217ENST00000598558 TAAR5O14804 337 aa10.3□□□□□ -0.76
SHKBP1-217ENST00000598558 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-217ENST00000598558 OR7C2O60412 319 aa10.3□□□□□ -0.76
SHKBP1-217ENST00000598558 SERF2P84101 59 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms