RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 TENM2Q9NT68 2774 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 ZNF705EA8MWA4 302 aaPredicted RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 H3BTX0 84 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 ZNF705DP0CH99 300 aaPredicted RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 ZNF705BP0CI00 300 aaPredicted RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 PRB4P10163 310 aaPredicted RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 RPL12P30050 165 aaKnown RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 BPIFA4PQ86YQ2 179 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 Q8NAQ8 132 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 WDR61Q9GZS3 305 aaKnown RBP16.53■□□□□ 0.24
IRF3-220ENST00000598108 SLC35B3Q9H1N7 401 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 SACSQ9NZJ4 4579 aa16.53■□□□□ 0.24
IRF3-220ENST00000598108 H3BQ15 152 aa16.52■□□□□ 0.24
IRF3-220ENST00000598108 RBMY1A1P0DJD3 496 aaKnown RBP16.52■□□□□ 0.24
IRF3-220ENST00000598108 RBMY1CP0DJD4 496 aa16.52■□□□□ 0.24
IRF3-220ENST00000598108 RBMY1FQ15415 496 aaKnown RBP16.52■□□□□ 0.24
IRF3-220ENST00000598108 PFDN5Q99471 154 aa16.52■□□□□ 0.24
IRF3-220ENST00000598108 C11orf68Q9H3H3 251 aaKnown RBP16.52■□□□□ 0.24
IRF3-220ENST00000598108 IGHV4-28A0A0C4DH34 117 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 A8MTW9 85 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 IGLC2P0DOY2 106 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 PSG9Q00887 426 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 PMS2P11Q13670 270 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 PSG3Q16557 428 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 RGS21Q2M5E4 152 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 ZNF738Q8NE65 137 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 LRRC20Q8TCA0 184 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 ATP5SQ99766 215 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 C1QTNF4Q9BXJ3 329 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 SMIM3Q9BZL3 60 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 WFDC1Q9HC57 220 aa16.51■□□□□ 0.23
IRF3-220ENST00000598108 CXorf65A6NEN9 183 aa16.5■□□□□ 0.23
IRF3-220ENST00000598108 SLC17A3O00476 420 aa16.5■□□□□ 0.23
IRF3-220ENST00000598108 CNN1P51911 297 aaKnown RBP16.5■□□□□ 0.23
IRF3-220ENST00000598108 AMTNQ6UX39 209 aa16.5■□□□□ 0.23
IRF3-220ENST00000598108 ZNF331Q9NQX6 463 aaPredicted RBP16.5■□□□□ 0.23
IRF3-220ENST00000598108 Q5BKY6 102 aa16.49■□□□□ 0.23
IRF3-220ENST00000598108 LCN15Q6UWW0 184 aa16.49■□□□□ 0.23
IRF3-220ENST00000598108 SAT2Q96F10 170 aaPredicted RBP16.49■□□□□ 0.23
IRF3-220ENST00000598108 HRH4Q9H3N8 390 aa16.49■□□□□ 0.23
IRF3-220ENST00000598108 MIFP14174 115 aa16.48■□□□□ 0.23
IRF3-220ENST00000598108 CXCL2P19875 107 aa16.48■□□□□ 0.23
IRF3-220ENST00000598108 OXA1LQ15070 435 aa16.48■□□□□ 0.23
IRF3-220ENST00000598108 MFFQ9GZY8 342 aa16.48■□□□□ 0.23
IRF3-220ENST00000598108 ZNF586Q9NXT0 402 aa16.48■□□□□ 0.23
IRF3-220ENST00000598108 PLECQ15149 4684 aaKnown RBP16.48■□□□□ 0.23
IRF3-220ENST00000598108 ZNF705FA8MVS1 300 aaPredicted RBP16.47■□□□□ 0.23
IRF3-220ENST00000598108 NANOS2P60321 138 aaKnown RBP16.47■□□□□ 0.23
IRF3-220ENST00000598108 ZNF705AQ6ZN79 300 aaPredicted RBP16.47■□□□□ 0.23
IRF3-220ENST00000598108 OR8A1Q8NGG7 326 aa16.47■□□□□ 0.23
IRF3-220ENST00000598108 DUSP14O95147 198 aaKnown RBP16.46■□□□□ 0.23
IRF3-220ENST00000598108 C11orf45Q8TAV5 145 aa16.46■□□□□ 0.23
IRF3-220ENST00000598108 RPUSD4Q96CM3 377 aaKnown RBP16.46■□□□□ 0.23
IRF3-220ENST00000598108 SLC50A1Q9BRV3 221 aa16.46■□□□□ 0.23
IRF3-220ENST00000598108 RFNGQ9Y644 331 aa16.46■□□□□ 0.23
IRF3-220ENST00000598108 HIST1H1AQ02539 215 aaPredicted RBP16.45■□□□□ 0.22
IRF3-220ENST00000598108 MIR17HGQ75NE6 70 aa16.45■□□□□ 0.22
IRF3-220ENST00000598108 C1orf158Q8N1D5 194 aa16.45■□□□□ 0.22
IRF3-220ENST00000598108 FAM167A-AS1Q96KT0 104 aa16.45■□□□□ 0.22
IRF3-220ENST00000598108 TMEM14CQ9P0S9 112 aa16.45■□□□□ 0.22
IRF3-220ENST00000598108 RYR2Q92736 4967 aa16.45■□□□□ 0.22
IRF3-220ENST00000598108 IGHV3OR16-12A0A075B7B8 117 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 PRAC2D3DTV9 90 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 IFNA5P01569 189 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 PYYP10082 97 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 GUK1Q16774 197 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 CEMP1Q6PRD7 247 aaPredicted RBP16.44■□□□□ 0.22
IRF3-220ENST00000598108 SLC25A2Q9BXI2 301 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 LYSTQ99698 3801 aa16.44■□□□□ 0.22
IRF3-220ENST00000598108 LCE6AA0A183 80 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 C17orf112F2Z3M2 114 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 M0R2Z0 102 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 GIPP09681 153 aaPredicted RBP16.43■□□□□ 0.22
IRF3-220ENST00000598108 HIST1H1EP10412 219 aaKnown RBP16.43■□□□□ 0.22
IRF3-220ENST00000598108 SPINK13Q1W4C9 94 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 SCGB1C1Q8TD33 95 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 PHLDA1Q8WV24 401 aaPredicted RBP16.43■□□□□ 0.22
IRF3-220ENST00000598108 KCNIP2Q9NS61 270 aa16.43■□□□□ 0.22
IRF3-220ENST00000598108 TRBV19A0A075B6N1 114 aa16.42■□□□□ 0.22
IRF3-220ENST00000598108 CRXO43186 299 aaPredicted RBP16.42■□□□□ 0.22
IRF3-220ENST00000598108 NDUFB4O95168 129 aa16.42■□□□□ 0.22
IRF3-220ENST00000598108 NEU1Q99519 415 aa16.42■□□□□ 0.22
IRF3-220ENST00000598108 PARD6GQ9BYG4 376 aaPredicted RBP16.42■□□□□ 0.22
IRF3-220ENST00000598108 DNAH1Q9P2D7 4330 aa16.41■□□□□ 0.22
IRF3-220ENST00000598108 FFAR4Q5NUL3 377 aa16.41■□□□□ 0.22
IRF3-220ENST00000598108 IGF2BP2-AS1Q96M15 143 aa16.41■□□□□ 0.22
IRF3-220ENST00000598108 NUPR2A6NF83 97 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 RHOBP62745 196 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 AQP10Q96PS8 301 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 CELA1Q9UNI1 258 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 FUT9Q9Y231 359 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 GOLT1BQ9Y3E0 138 aa16.4■□□□□ 0.22
IRF3-220ENST00000598108 TRAV12-2A0A075B6T6 113 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 SMIM9A6NGZ8 99 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 ZNF253O75346 499 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 BAP18Q8IXM2 172 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 BLNKQ8WV28 456 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 ASB13Q8WXK3 278 aa16.39■□□□□ 0.21
IRF3-220ENST00000598108 MRPL32Q9BYC8 188 aaKnown RBP16.39■□□□□ 0.21
IRF3-220ENST00000598108 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms