RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 RBMY1CP0DJD4 496 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 PSG9Q00887 426 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 CLINT1Q14677 625 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 RBMY1FQ15415 496 aaKnown RBP15.27■□□□□ 0.04
PNKP-209ENST00000596726 THAP6Q8TBB0 222 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 WDR61Q9GZS3 305 aaKnown RBP15.27■□□□□ 0.04
PNKP-209ENST00000596726 MBD2Q9UBB5 411 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
PNKP-209ENST00000596726 TRAV5A0A0B4J249 113 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 IGHV4-28A0A0C4DH34 117 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 DEFB4AO15263 64 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 IGLC2P0DOY2 106 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 FXYD7P58549 80 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 LCN15Q6UWW0 184 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 AMTNQ6UX39 209 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 SLC35B3Q9H1N7 401 aa15.26■□□□□ 0.03
PNKP-209ENST00000596726 PLECQ15149 4684 aaKnown RBP15.26■□□□□ 0.03
PNKP-209ENST00000596726 DUSP14O95147 198 aaKnown RBP15.25■□□□□ 0.03
PNKP-209ENST00000596726 RPL12P30050 165 aaKnown RBP15.25■□□□□ 0.03
PNKP-209ENST00000596726 PMS2P11Q13670 270 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 FCN2Q15485 313 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 PSG3Q16557 428 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 ZNF705AQ6ZN79 300 aaPredicted RBP15.25■□□□□ 0.03
PNKP-209ENST00000596726 OR11H7Q8NGC8 314 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 LRRC20Q8TCA0 184 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 SLC50A1Q9BRV3 221 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 MED28Q9H204 178 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 HRH4Q9H3N8 390 aa15.25■□□□□ 0.03
PNKP-209ENST00000596726 ZNF331Q9NQX6 463 aaPredicted RBP15.25■□□□□ 0.03
PNKP-209ENST00000596726 LCE6AA0A183 80 aa15.24■□□□□ 0.03
PNKP-209ENST00000596726 CXorf65A6NEN9 183 aa15.24■□□□□ 0.03
PNKP-209ENST00000596726 H3BQ15 152 aa15.24■□□□□ 0.03
PNKP-209ENST00000596726 CNN1P51911 297 aaKnown RBP15.24■□□□□ 0.03
PNKP-209ENST00000596726 ZNF738Q8NE65 137 aa15.24■□□□□ 0.03
PNKP-209ENST00000596726 SAT2Q96F10 170 aaPredicted RBP15.24■□□□□ 0.03
PNKP-209ENST00000596726 ATP5SQ99766 215 aa15.24■□□□□ 0.03
PNKP-209ENST00000596726 ZNF705FA8MVS1 300 aaPredicted RBP15.23■□□□□ 0.03
PNKP-209ENST00000596726 SNRPCP09234 159 aaKnown RBP15.23■□□□□ 0.03
PNKP-209ENST00000596726 ZNF705DP0CH99 300 aaPredicted RBP15.23■□□□□ 0.03
PNKP-209ENST00000596726 ZNF705BP0CI00 300 aaPredicted RBP15.23■□□□□ 0.03
PNKP-209ENST00000596726 GCSAMLQ5JQS6 135 aa15.23■□□□□ 0.03
PNKP-209ENST00000596726 C11orf45Q8TAV5 145 aa15.23■□□□□ 0.03
PNKP-209ENST00000596726 NEU1Q99519 415 aa15.23■□□□□ 0.03
PNKP-209ENST00000596726 NUPR2A6NF83 97 aa15.22■□□□□ 0.03
PNKP-209ENST00000596726 SLC17A3O00476 420 aa15.22■□□□□ 0.03
PNKP-209ENST00000596726 GUK1Q16774 197 aa15.22■□□□□ 0.03
PNKP-209ENST00000596726 CEMP1Q6PRD7 247 aaPredicted RBP15.22■□□□□ 0.03
PNKP-209ENST00000596726 MFFQ9GZY8 342 aa15.22■□□□□ 0.03
PNKP-209ENST00000596726 H3BTX0 84 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 NANOS2P60321 138 aaKnown RBP15.21■□□□□ 0.03
PNKP-209ENST00000596726 RGS21Q2M5E4 152 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 OR8A1Q8NGG7 326 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 KCNIP2Q9NS61 270 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 ZNF586Q9NXT0 402 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 TMEM14CQ9P0S9 112 aa15.21■□□□□ 0.03
PNKP-209ENST00000596726 DNAH1Q9P2D7 4330 aa15.21■□□□□ 0.02
PNKP-209ENST00000596726 RYR2Q92736 4967 aa15.2■□□□□ 0.02
PNKP-209ENST00000596726 C1orf158Q8N1D5 194 aa15.2■□□□□ 0.02
PNKP-209ENST00000596726 PHLDA1Q8WV24 401 aaPredicted RBP15.2■□□□□ 0.02
PNKP-209ENST00000596726 RPUSD4Q96CM3 377 aaKnown RBP15.2■□□□□ 0.02
PNKP-209ENST00000596726 SMIM3Q9BZL3 60 aa15.2■□□□□ 0.02
PNKP-209ENST00000596726 WFDC1Q9HC57 220 aa15.2■□□□□ 0.02
PNKP-209ENST00000596726 SMIM9A6NGZ8 99 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 C17orf112F2Z3M2 114 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 ZNF253O75346 499 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 AMBPP02760 352 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 OXA1LQ15070 435 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 IGF2BP2-AS1Q96M15 143 aa15.19■□□□□ 0.02
PNKP-209ENST00000596726 PARD6GQ9BYG4 376 aaPredicted RBP15.19■□□□□ 0.02
PNKP-209ENST00000596726 CRXO43186 299 aaPredicted RBP15.18■□□□□ 0.02
PNKP-209ENST00000596726 HIST1H1EP10412 219 aaKnown RBP15.18■□□□□ 0.02
PNKP-209ENST00000596726 HIST1H1AQ02539 215 aaPredicted RBP15.18■□□□□ 0.02
PNKP-209ENST00000596726 ASB13Q8WXK3 278 aa15.18■□□□□ 0.02
PNKP-209ENST00000596726 FAM167A-AS1Q96KT0 104 aa15.18■□□□□ 0.02
PNKP-209ENST00000596726 ALMS1Q8TCU4 4167 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 TRBV19A0A075B6N1 114 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 IFNA5P01569 189 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 GIPP09681 153 aaPredicted RBP15.17■□□□□ 0.02
PNKP-209ENST00000596726 SPINK13Q1W4C9 94 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 MIR17HGQ75NE6 70 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 SLC25A2Q9BXI2 301 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 GOLT1BQ9Y3E0 138 aa15.17■□□□□ 0.02
PNKP-209ENST00000596726 IGHV3OR16-12A0A075B7B8 117 aa15.16■□□□□ 0.02
PNKP-209ENST00000596726 PRAC2D3DTV9 90 aa15.16■□□□□ 0.02
PNKP-209ENST00000596726 M0R2Z0 102 aa15.16■□□□□ 0.02
PNKP-209ENST00000596726 PYYP10082 97 aa15.16■□□□□ 0.02
PNKP-209ENST00000596726 PRB4P10163 310 aaPredicted RBP15.16■□□□□ 0.02
PNKP-209ENST00000596726 Q5BKY6 102 aa15.16■□□□□ 0.02
PNKP-209ENST00000596726 MRPL32Q9BYC8 188 aaKnown RBP15.16■□□□□ 0.02
PNKP-209ENST00000596726 KLK5Q9Y337 293 aaPredicted RBP15.16■□□□□ 0.02
PNKP-209ENST00000596726 BOLA2-SMG1P6H3BVE0 249 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 JTBO76095 146 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 NDUFB4O95168 129 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 PDE6HQ13956 83 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 AQP10Q96PS8 301 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 CELA1Q9UNI1 258 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 FUT9Q9Y231 359 aa15.15■□□□□ 0.02
PNKP-209ENST00000596726 RHOBP62745 196 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms