RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 GIG44P09565 113 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 PSG9Q00887 426 aa12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 GDF5OSQ5U4N7 250 aa12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 AQP10Q96PS8 301 aa12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
SHKBP1-212ENST00000596163 A0A0J9YWU9 116 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 IGLC2P0DOY2 106 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 C4BPBP20851 252 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 DEFB1P60022 68 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 ZNF266Q14584 549 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 MORN5Q5VZ52 161 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 RNF182Q8N6D2 247 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 OR2T35Q8NGX2 323 aa12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 ZNF331Q9NQX6 463 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-212ENST00000596163 F6UB75 175 aa12.6□□□□□ -0.39
SHKBP1-212ENST00000596163 FFAR4Q5NUL3 377 aa12.6□□□□□ -0.39
SHKBP1-212ENST00000596163 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
SHKBP1-212ENST00000596163 H3BQ15 152 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 ZNF253O75346 499 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 AMBPP02760 352 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 HIST1H1EP10412 219 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 Q5BKY6 102 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 GCSAMLQ5JQS6 135 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 FUT9Q9Y231 359 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 TIMM9Q9Y5J7 89 aa12.59□□□□□ -0.39
SHKBP1-212ENST00000596163 FXYD6-FXYD2A0A087WZ82 144 aa12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF705EA8MWA4 302 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 MIFP14174 115 aa12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 CNN1P51911 297 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 PDE6HQ13956 83 aa12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 MFFQ9GZY8 342 aa12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-212ENST00000596163 A8MTW9 85 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 H3BTX0 84 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 TAS2R45P59539 299 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 RHOBP62745 196 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 ACOT6Q3I5F7 207 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 MIR17HGQ75NE6 70 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
SHKBP1-212ENST00000596163 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 HLA-DMBP28068 263 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 FXYD7P58549 80 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 SLC25A2Q9BXI2 301 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 TNFSF18Q9UNG2 199 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 PRELID1Q9Y255 219 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
SHKBP1-212ENST00000596163 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 A0A1W2PPV4 95 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 SLC17A3O00476 420 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 M6PRP20645 277 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 FAM167A-AS1Q96KT0 104 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 AAMDCQ9H7C9 122 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 AGRNO00468 2067 aa12.55□□□□□ -0.4
SHKBP1-212ENST00000596163 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 OR7C2O60412 319 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF705DP0CH99 300 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF705BP0CI00 300 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 PYYP10082 97 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 KHDC3LQ587J8 217 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 BLNKQ8WV28 456 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 RNF141Q8WVD5 230 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 NEU1Q99519 415 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 X6R8D5 127 aa12.54□□□□□ -0.4
SHKBP1-212ENST00000596163 IGHV4-28A0A0C4DH34 117 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 TAAR5O14804 337 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 MBP02144 154 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 SERF2P84101 59 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 Q8NAQ8 132 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 OR2G3Q8NGZ4 309 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
SHKBP1-212ENST00000596163 DNAH7Q8WXX0 4024 aa12.52□□□□□ -0.4
SHKBP1-212ENST00000596163 RNF222A6NCQ9 220 aa12.52□□□□□ -0.41
SHKBP1-212ENST00000596163 CXorf65A6NEN9 183 aa12.52□□□□□ -0.41
SHKBP1-212ENST00000596163 BOLA2-SMG1P6H3BVE0 249 aa12.52□□□□□ -0.41
SHKBP1-212ENST00000596163 INSP01308 110 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms