RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 A8MTW9 85 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 G3V3Q6 166 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 SLC17A3O00476 420 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 DEFB4AO15263 64 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 MPDU1O75352 247 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 S100A7P31151 101 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 SAT2Q96F10 170 aaPredicted RBP8.09□□□□□ -1.11
VRK3-210ENST00000596121 ATP5SQ99766 215 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 RARRES2Q99969 163 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 SLC35B3Q9H1N7 401 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 XCL2Q9UBD3 114 aa8.09□□□□□ -1.11
VRK3-210ENST00000596121 PRAC2D3DTV9 90 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 GIPP09681 153 aaPredicted RBP8.08□□□□□ -1.12
VRK3-210ENST00000596121 PET100P0DJ07 73 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 SAMD13Q5VXD3 122 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 OR4B1Q8NGF8 309 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 OR1L4Q8NGR5 311 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 IL17DQ8TAD2 202 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 FAM167A-AS1Q96KT0 104 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 ZNF331Q9NQX6 463 aaPredicted RBP8.08□□□□□ -1.12
VRK3-210ENST00000596121 RPRMQ9NS64 109 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 ZNF586Q9NXT0 402 aa8.08□□□□□ -1.12
VRK3-210ENST00000596121 ZNF705FA8MVS1 300 aaPredicted RBP8.07□□□□□ -1.12
VRK3-210ENST00000596121 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
VRK3-210ENST00000596121 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
VRK3-210ENST00000596121 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 CNN1P51911 297 aaKnown RBP8.07□□□□□ -1.12
VRK3-210ENST00000596121 PSG9Q00887 426 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
VRK3-210ENST00000596121 PSG3Q16557 428 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 MIR17HGQ75NE6 70 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 BPIFA4PQ86YQ2 179 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 Q8NAQ8 132 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 ZNF738Q8NE65 137 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 PFDN5Q99471 154 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 SLC25A2Q9BXI2 301 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 HRH4Q9H3N8 390 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 RYR2Q92736 4967 aa8.07□□□□□ -1.12
VRK3-210ENST00000596121 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 EIF3GO75821 320 aaKnown RBP eCLIP8.06□□□□□ -1.12
VRK3-210ENST00000596121 NDUFB4O95168 129 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 PYYP10082 97 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 EBLN2Q6P2I7 272 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 TMEM14CQ9P0S9 112 aa8.06□□□□□ -1.12
VRK3-210ENST00000596121 RNF222A6NCQ9 220 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 SMLR1H3BR10 107 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 CRXO43186 299 aaPredicted RBP8.05□□□□□ -1.12
VRK3-210ENST00000596121 CXCL2P19875 107 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 TMEM41BQ5BJD5 291 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 LCN15Q6UWW0 184 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 ZNF705AQ6ZN79 300 aaPredicted RBP8.05□□□□□ -1.12
VRK3-210ENST00000596121 C1orf158Q8N1D5 194 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 OR8A1Q8NGG7 326 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 OR2T35Q8NGX2 323 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 LRRC20Q8TCA0 184 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 RPUSD4Q96CM3 377 aaKnown RBP8.05□□□□□ -1.12
VRK3-210ENST00000596121 ZNF503Q96F45 646 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 AQP10Q96PS8 301 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 PARD6GQ9BYG4 376 aaPredicted RBP8.05□□□□□ -1.12
VRK3-210ENST00000596121 MFFQ9GZY8 342 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 C11orf68Q9H3H3 251 aaKnown RBP8.05□□□□□ -1.12
VRK3-210ENST00000596121 RNF24Q9Y225 148 aa8.05□□□□□ -1.12
VRK3-210ENST00000596121 TRBV19A0A075B6N1 114 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 M0R2Z0 102 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 IFNA5P01569 189 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 PRM2P04554 102 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 NANOS2P60321 138 aaKnown RBP8.04□□□□□ -1.12
VRK3-210ENST00000596121 NUTF2P61970 127 aaKnown RBP8.04□□□□□ -1.12
VRK3-210ENST00000596121 HIST1H1AQ02539 215 aaPredicted RBP8.04□□□□□ -1.12
VRK3-210ENST00000596121 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 SCGB1C1Q8TD33 95 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 ASB13Q8WXK3 278 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 SLC50A1Q9BRV3 221 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 TNFSF18Q9UNG2 199 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 FUT9Q9Y231 359 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
VRK3-210ENST00000596121 C17orf112F2Z3M2 114 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 M0R3E3 92 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
VRK3-210ENST00000596121 HIST1H1EP10412 219 aaKnown RBP8.03□□□□□ -1.12
VRK3-210ENST00000596121 RAB2AP61019 212 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 PMS2P11Q13670 270 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 KIR3DS1Q14943 382 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 GUK1Q16774 197 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 SPINK13Q1W4C9 94 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 LYSTQ99698 3801 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 C1QTNF4Q9BXJ3 329 aa8.03□□□□□ -1.12
VRK3-210ENST00000596121 TRAV12-2A0A075B6T6 113 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 IGHV3OR16-12A0A075B7B8 117 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 FXYD6-FXYD2A0A087WZ82 144 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 ZNF253O75346 499 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 OR10J4P0C629 311 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 MIFP14174 115 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 BAP18Q8IXM2 172 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 BLNKQ8WV28 456 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms