RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 COX8AP10176 69 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 HTR1DP28221 377 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 C16orf54Q6UWD8 224 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 WNK2Q9Y3S1 2297 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 CD24P25063 80 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 RPL27AP46776 148 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 TMEM97Q5BJF2 176 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 PPP1R27Q86WC6 154 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 CACNG8Q8WXS5 425 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 MYO18BQ8IUG5 2567 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 CRYGBP07316 175 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 ZFP36P26651 326 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 PLGLAQ15195 96 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 BPIFA4PQ86YQ2 179 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 NHLRC2Q8NBF2 726 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 FAM168AQ92567 244 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 NPIPB3Q92617 1050 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 MAP1LC3CQ9BXW4 147 aa13.56□□□□□ -0.24
SHKBP1-205ENST00000594973 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 A6NDN8 102 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 OR1N2Q8NGR9 330 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 DPM3Q9P2X0 92 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 A0A1B0GXF2 115 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 CA1P00915 261 aaPredicted RBP13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 C2orf91Q6ZV80 131 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 OR11H6Q8NGC7 330 aa13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
SHKBP1-205ENST00000594973 CACNA1BQ00975 2339 aa13.54□□□□□ -0.24
SHKBP1-205ENST00000594973 M0R1W7 72 aa13.54□□□□□ -0.24
SHKBP1-205ENST00000594973 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
SHKBP1-205ENST00000594973 USP9XQ93008 2570 aaPredicted RBP13.54□□□□□ -0.24
SHKBP1-205ENST00000594973 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 A0A1B0GV72 72 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 TAS2R45P59539 299 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 RUSC1-AS1Q66K80 236 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 TMEM8BA6NDV4 472 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 PRTN3P24158 256 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 EFNA4P52798 201 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 VMO1Q7Z5L0 202 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 OR2K2Q8NGT1 345 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 DPF1Q92782 380 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 ABCA1O95477 2261 aa13.53□□□□□ -0.24
SHKBP1-205ENST00000594973 LINC00173Q6ZV60 143 aa13.52□□□□□ -0.24
SHKBP1-205ENST00000594973 ZNF503Q96F45 646 aa13.52□□□□□ -0.24
SHKBP1-205ENST00000594973 ZNF355PQ9NSJ1 428 aa13.52□□□□□ -0.24
SHKBP1-205ENST00000594973 HSPB8Q9UJY1 196 aa13.52□□□□□ -0.24
SHKBP1-205ENST00000594973 USP24Q9UPU5 2620 aa13.52□□□□□ -0.25
SHKBP1-205ENST00000594973 CRYBG3Q68DQ2 2970 aa13.52□□□□□ -0.25
SHKBP1-205ENST00000594973 HIST1H1EP10412 219 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-205ENST00000594973 LINC01545Q5VT33 79 aa13.52□□□□□ -0.25
SHKBP1-205ENST00000594973 CLUHP3Q96NS8 147 aa13.52□□□□□ -0.25
SHKBP1-205ENST00000594973 SH2D7A6NKC9 451 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 HES1Q14469 280 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 SRSF12Q8WXF0 261 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 SLC25A33Q9BSK2 321 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 SSBP4Q9BWG4 385 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 NPFFR1Q9GZQ6 430 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 SOX21Q9Y651 276 aaPredicted RBP13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 JMJD8Q96S16 334 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 BPESC1Q9GZL8 116 aa13.51□□□□□ -0.25
SHKBP1-205ENST00000594973 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 CNIH1O95406 144 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 HBBP68871 147 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 MORN5Q5VZ52 161 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 TRAV5A0A0B4J249 113 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 HIGD1CA8MV81 97 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 GNG7O60262 68 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 MOSP00540 346 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 CAMPP49913 170 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 PLP1P60201 277 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 CFHR4Q92496 578 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 SIGMAR1Q99720 223 aa13.5□□□□□ -0.25
SHKBP1-205ENST00000594973 TCRBV4S1A1TA0A5B7 111 aa13.49□□□□□ -0.25
SHKBP1-205ENST00000594973 PSMB11A5LHX3 300 aa13.49□□□□□ -0.25
SHKBP1-205ENST00000594973 DOPEY1Q5JWR5 2465 aa13.49□□□□□ -0.25
SHKBP1-205ENST00000594973 SPG11Q96JI7 2443 aa13.49□□□□□ -0.25
SHKBP1-205ENST00000594973 A0A0G2JLM5 398 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 H3BUT2 72 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 COX7A2P2O60397 106 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 DYNAPQ8N1N2 210 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 ZC2HC1AQ96GY0 325 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 RNF5Q99942 180 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 TMEM189A5PLL7 270 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 NBR2O15453 112 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 HOXB4P17483 251 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
SHKBP1-205ENST00000594973 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 AZU1P20160 251 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 ATP6V0BQ99437 205 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 NDFIP1Q9BT67 221 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 CELSR2Q9HCU4 2923 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 CELSR1Q9NYQ6 3014 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms