RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TNP2Q05952 138 aa15.89■□□□□ 0.13
SSBP4-203ENST00000593641 PSG3Q16557 428 aa15.89■□□□□ 0.13
SSBP4-203ENST00000593641 C6orf223Q8N319 242 aa15.89■□□□□ 0.13
SSBP4-203ENST00000593641 TIMM8BQ9Y5J9 83 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-203ENST00000593641 CDKN1BP46527 198 aa15.88■□□□□ 0.13
SSBP4-203ENST00000593641 RRAS2P62070 204 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-203ENST00000593641 ARL6Q9H0F7 186 aa15.88■□□□□ 0.13
SSBP4-203ENST00000593641 C9orf170A2RU37 121 aa15.87■□□□□ 0.13
SSBP4-203ENST00000593641 ANXA7P20073 488 aaKnown RBP15.87■□□□□ 0.13
SSBP4-203ENST00000593641 DLK1P80370 383 aa15.87■□□□□ 0.13
SSBP4-203ENST00000593641 CLINT1Q14677 625 aa15.87■□□□□ 0.13
SSBP4-203ENST00000593641 RPUSD4Q96CM3 377 aaKnown RBP15.87■□□□□ 0.13
SSBP4-203ENST00000593641 NPVFQ9HCQ7 196 aa15.87■□□□□ 0.13
SSBP4-203ENST00000593641 MGAT4CQ9UBM8 478 aa15.87■□□□□ 0.13
SSBP4-203ENST00000593641 PMS2P5A8MQ11 134 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 CXCL2P19875 107 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 ZNF493Q6ZR52 646 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 OR10P1Q8NGE3 313 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 TMEM263Q8WUH6 116 aaKnown RBP15.86■□□□□ 0.13
SSBP4-203ENST00000593641 RNF141Q8WVD5 230 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 SMIM8Q96KF7 97 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 ARV1Q9H2C2 271 aa15.86■□□□□ 0.13
SSBP4-203ENST00000593641 FNDC10F2Z333 226 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 METTL15P1P0C7V9 234 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 INPP1P49441 399 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 TEPPQ6URK8 271 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 LCN15Q6UWW0 184 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 NOP10Q9NPE3 64 aaKnown RBP15.85■□□□□ 0.13
SSBP4-203ENST00000593641 LINC00588Q9Y4M8 146 aa15.85■□□□□ 0.13
SSBP4-203ENST00000593641 H7BYZ3 331 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 CCNKO75909 580 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 SLC38A11Q08AI6 406 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 PXDC1Q5TGL8 231 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 TMEM14EPQ6UXP3 125 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 OR10J6PQ8NGY7 276 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 RNASE8Q8TDE3 154 aaKnown RBP15.84■□□□□ 0.13
SSBP4-203ENST00000593641 SLC50A1Q9BRV3 221 aa15.84■□□□□ 0.13
SSBP4-203ENST00000593641 CCDC160A6NGH7 325 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 K7EPK0 472 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 SCGB1D2O95969 90 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 PRB4P10163 310 aaPredicted RBP15.83■□□□□ 0.12
SSBP4-203ENST00000593641 PATE2Q6UY27 113 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 ZNF546Q86UE3 836 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 C20orf144Q9BQM9 153 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 KRTAP4-5Q9BYR2 181 aa15.83■□□□□ 0.12
SSBP4-203ENST00000593641 NAP1L6A6NFF2 107 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 GOSR2O14653 212 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 MRPS12O15235 138 aaKnown RBP15.82■□□□□ 0.12
SSBP4-203ENST00000593641 CDK2AP2O75956 126 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 NDUFB6O95139 128 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 SPANXN2Q5MJ10 180 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 SSX7Q7RTT5 188 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 LINC00305Q7Z4B0 112 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 CCDC190Q86UF4 302 aa15.82■□□□□ 0.12
SSBP4-203ENST00000593641 TSC22D2O75157 780 aa15.81■□□□□ 0.12
SSBP4-203ENST00000593641 OR4E1P0C645 316 aa15.81■□□□□ 0.12
SSBP4-203ENST00000593641 TRIQKQ629K1 86 aa15.81■□□□□ 0.12
SSBP4-203ENST00000593641 BPIFA4PQ86YQ2 179 aa15.81■□□□□ 0.12
SSBP4-203ENST00000593641 CCDC28AQ8IWP9 274 aa15.81■□□□□ 0.12
SSBP4-203ENST00000593641 ZNF331Q9NQX6 463 aaPredicted RBP15.81■□□□□ 0.12
SSBP4-203ENST00000593641 OR5I1Q13606 314 aa15.8■□□□□ 0.12
SSBP4-203ENST00000593641 IAH1Q2TAA2 248 aaPredicted RBP15.8■□□□□ 0.12
SSBP4-203ENST00000593641 C4orf46Q504U0 113 aa15.8■□□□□ 0.12
SSBP4-203ENST00000593641 GNPNAT1Q96EK6 184 aaPredicted RBP15.8■□□□□ 0.12
SSBP4-203ENST00000593641 SRRQ9GZT4 340 aa15.8■□□□□ 0.12
SSBP4-203ENST00000593641 FLVCR2Q9UPI3 526 aa15.8■□□□□ 0.12
SSBP4-203ENST00000593641 COX7A2P2O60397 106 aa15.79■□□□□ 0.12
SSBP4-203ENST00000593641 SNRPCP09234 159 aaKnown RBP15.79■□□□□ 0.12
SSBP4-203ENST00000593641 TAS2R30P59541 319 aa15.79■□□□□ 0.12
SSBP4-203ENST00000593641 Q9H8V8 135 aa15.79■□□□□ 0.12
SSBP4-203ENST00000593641 TRAV26-1A0A087WT03 109 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 AGPAT2O15120 278 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 M6PRP20645 277 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 TTC32Q5I0X7 151 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 GGACTQ9BVM4 153 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 GSKIPQ9P0R6 139 aa15.78■□□□□ 0.12
SSBP4-203ENST00000593641 SNURFLB1AK76 121 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 RLN2P04090 185 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 GFI1BQ5VTD9 330 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 MAPKAPK5-AS1Q8N8E1 139 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 ZBTB8BQ8NAP8 495 aaPredicted RBP15.77■□□□□ 0.12
SSBP4-203ENST00000593641 ZNF503Q96F45 646 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 PARD6GQ9BYG4 376 aaPredicted RBP15.77■□□□□ 0.12
SSBP4-203ENST00000593641 RCL1Q9Y2P8 373 aaKnown RBP15.77■□□□□ 0.12
SSBP4-203ENST00000593641 PXMP4Q9Y6I8 212 aa15.77■□□□□ 0.12
SSBP4-203ENST00000593641 KIR3DS1Q14943 382 aa15.76■□□□□ 0.11
SSBP4-203ENST00000593641 RXFP4Q8TDU9 374 aa15.76■□□□□ 0.11
SSBP4-203ENST00000593641 APOBP04114 4563 aaKnown RBP15.76■□□□□ 0.11
SSBP4-203ENST00000593641 A0A0J9YY99 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 GAGE12BA1L429 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 CENPXA8MT69 81 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 H3BTX0 84 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 SLC17A3O00476 420 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 GAGE7O76087 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 GAGE12FP0CL80 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 GAGE12GP0CL81 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 GAGE12IP0CL82 117 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 C10orf113Q5VZT2 155 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 LINC00612Q8N6U2 182 aa15.75■□□□□ 0.11
SSBP4-203ENST00000593641 DNAH5Q8TE73 4624 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms