RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SOHLH1Q5JUK2 328 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 LCE2DQ5TA82 110 aaPredicted RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 C1QL4Q86Z23 238 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 CYB561D1Q8N8Q1 229 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 KLHL30-AS1Q8NEE0 82 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 OR11H1Q8NG94 326 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 OR1N2Q8NGR9 330 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 BLNKQ8WV28 456 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 GRAMD2BQ96HH9 432 aa10.26□□□□□ -0.77
VMP1-217ENST00000593168 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
VMP1-217ENST00000593168 KMT2CQ8NEZ4 4911 aaKnown RBP10.25□□□□□ -0.77
VMP1-217ENST00000593168 TRBV19A0A075B6N1 114 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 A0A087X0K7 114 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 A8MWP6 167 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 ZNF253O75346 499 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 GALR1P47211 349 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 RANP62826 216 aaKnown RBP10.25□□□□□ -0.77
VMP1-217ENST00000593168 SUMO1P63165 101 aaKnown RBP10.25□□□□□ -0.77
VMP1-217ENST00000593168 TM4SF20Q53R12 229 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 LYPD1Q8N2G4 141 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 CITED2Q99967 270 aaPredicted RBP10.25□□□□□ -0.77
VMP1-217ENST00000593168 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 SMPXQ9UHP9 88 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 SMAD5-AS1Q9Y6J3 95 aa10.25□□□□□ -0.77
VMP1-217ENST00000593168 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 M0QZ24 198 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 NDUFB4O95168 129 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 BMI1P35226 326 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 MEOX2P50222 304 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 FAM90A2PQ658T7 463 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 C11orf44Q8N8P7 122 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 C11orf52Q96A22 123 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 OTORQ9NRC9 128 aa10.24□□□□□ -0.77
VMP1-217ENST00000593168 RYR3Q15413 4870 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 IGHV3-49A0A0A0MS15 119 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 IGHV3-66A0A0C4DH42 116 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 TMEM213A2RRL7 107 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 PGPA6NDG6 321 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 ZNF785A8K8V0 405 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 SNRPCP09234 159 aaKnown RBP10.23□□□□□ -0.77
VMP1-217ENST00000593168 ATF4P18848 351 aaPredicted RBP10.23□□□□□ -0.77
VMP1-217ENST00000593168 SYNJ2BPP57105 145 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 FHL3Q13643 280 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 ELOVL1Q9BW60 279 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 Q9H3A6 140 aa10.23□□□□□ -0.77
VMP1-217ENST00000593168 HELTA6NFD8 242 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 H3BTX0 84 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 CHEK1O14757 476 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 APOC3P02656 99 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 CEBPGP53567 150 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 SLURP1P55000 103 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 PSG9Q00887 426 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 SIGLEC15Q6ZMC9 328 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 HIST1H2BAQ96A08 127 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 RPUSD4Q96CM3 377 aaKnown RBP10.22□□□□□ -0.77
VMP1-217ENST00000593168 C17orf77Q96MU5 243 aa10.22□□□□□ -0.77
VMP1-217ENST00000593168 SCO2A0A1W2PP80 73 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 CCL24O00175 119 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 ARL6IP6Q8N6S5 226 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 C5orf17Q8NAS9 161 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 SLC50A1Q9BRV3 221 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 PARLQ9H300 379 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 PEMTQ9UBM1 199 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 EPDR1Q9UM22 224 aa10.21□□□□□ -0.77
VMP1-217ENST00000593168 C2orf70A6NJV1 201 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 ADARB2-AS1A8MUL3 147 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 SLC17A3O00476 420 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 SLC25A5P05141 298 aaKnown RBP10.2□□□□□ -0.78
VMP1-217ENST00000593168 CBLN1P23435 193 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 SVBPQ8N300 66 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 SMIM7Q9BQ49 75 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
VMP1-217ENST00000593168 ZNF331Q9NQX6 463 aaPredicted RBP10.2□□□□□ -0.78
VMP1-217ENST00000593168 A0A1W2PRX2 142 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 PEX7O00628 323 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 GUCA2BQ16661 112 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 CMTM2Q8TAZ6 248 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 C2CD4CQ8TF44 421 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 DLX4Q92988 240 aaPredicted RBP10.19□□□□□ -0.78
VMP1-217ENST00000593168 DUX3Q96PT4 197 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 CLEC5AQ9NY25 188 aa10.19□□□□□ -0.78
VMP1-217ENST00000593168 NBEAL2Q6ZNJ1 2754 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 SNAPINO95295 136 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms