RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 PMS2P11Q13670 270 aa10.53□□□□□ -0.72
DDX39A-217ENST00000592391 LCN15Q6UWW0 184 aa10.53□□□□□ -0.72
DDX39A-217ENST00000592391 MBD2Q9UBB5 411 aa10.53□□□□□ -0.72
DDX39A-217ENST00000592391 HSPB11Q9Y547 144 aa10.53□□□□□ -0.72
DDX39A-217ENST00000592391 DYNC2H1Q8NCM8 4307 aaKnown RBP10.52□□□□□ -0.73
DDX39A-217ENST00000592391 IGHV4-28A0A0C4DH34 117 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 DEFB4AO15263 64 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 DUSP14O95147 198 aaKnown RBP10.52□□□□□ -0.73
DDX39A-217ENST00000592391 IGLC2P0DOY2 106 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
DDX39A-217ENST00000592391 FXYD7P58549 80 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF738Q8NE65 137 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 ATP5SQ99766 215 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 WDR61Q9GZS3 305 aaKnown RBP10.52□□□□□ -0.73
DDX39A-217ENST00000592391 SLC35B3Q9H1N7 401 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 MED28Q9H204 178 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-217ENST00000592391 TRAV5A0A0B4J249 113 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 SNRPCP09234 159 aaKnown RBP10.51□□□□□ -0.73
DDX39A-217ENST00000592391 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
DDX39A-217ENST00000592391 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 CNN1P51911 297 aaKnown RBP10.51□□□□□ -0.73
DDX39A-217ENST00000592391 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
DDX39A-217ENST00000592391 FCN2Q15485 313 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 PSG3Q16557 428 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-217ENST00000592391 OR11H7Q8NGC8 314 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 KCNIP2Q9NS61 270 aa10.51□□□□□ -0.73
DDX39A-217ENST00000592391 TENM2Q9NT68 2774 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 LCE6AA0A183 80 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 NUPR2A6NF83 97 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 H3BQ15 152 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 GUK1Q16774 197 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 RGS21Q2M5E4 152 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 GCSAMLQ5JQS6 135 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 SAT2Q96F10 170 aaPredicted RBP10.5□□□□□ -0.73
DDX39A-217ENST00000592391 MFFQ9GZY8 342 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 LYSTQ99698 3801 aa10.5□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF705FA8MVS1 300 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 H3BTX0 84 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 SLC17A3O00476 420 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF705DP0CH99 300 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 RPUSD4Q96CM3 377 aaKnown RBP10.49□□□□□ -0.73
DDX39A-217ENST00000592391 NEU1Q99519 415 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 TMEM14CQ9P0S9 112 aa10.49□□□□□ -0.73
DDX39A-217ENST00000592391 IFNA5P01569 189 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 AMBPP02760 352 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-217ENST00000592391 PHLDA1Q8WV24 401 aaPredicted RBP10.48□□□□□ -0.73
DDX39A-217ENST00000592391 ASB13Q8WXK3 278 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF586Q9NXT0 402 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 GOLT1BQ9Y3E0 138 aa10.48□□□□□ -0.73
DDX39A-217ENST00000592391 SACSQ9NZJ4 4579 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 SMIM9A6NGZ8 99 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 ZNF253O75346 499 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 JTBO76095 146 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 OXA1LQ15070 435 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 SCGB1C1Q8TD33 95 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 IGF2BP2-AS1Q96M15 143 aa10.47□□□□□ -0.73
DDX39A-217ENST00000592391 PARD6GQ9BYG4 376 aaPredicted RBP10.47□□□□□ -0.73
DDX39A-217ENST00000592391 KLK5Q9Y337 293 aaPredicted RBP10.47□□□□□ -0.73
DDX39A-217ENST00000592391 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.73
DDX39A-217ENST00000592391 HIST1H1EP10412 219 aaKnown RBP10.46□□□□□ -0.73
DDX39A-217ENST00000592391 SPINK13Q1W4C9 94 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 MIR17HGQ75NE6 70 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 SLC25A2Q9BXI2 301 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 MRPL32Q9BYC8 188 aaKnown RBP10.46□□□□□ -0.73
DDX39A-217ENST00000592391 WFDC1Q9HC57 220 aa10.46□□□□□ -0.73
DDX39A-217ENST00000592391 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.74
DDX39A-217ENST00000592391 BOLA2-SMG1P6H3BVE0 249 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 M0R2Z0 102 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-217ENST00000592391 PYYP10082 97 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 PRB4P10163 310 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-217ENST00000592391 RHOBP62745 196 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 PDE6HQ13956 83 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 FUT9Q9Y231 359 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 RFNGQ9Y644 331 aa10.45□□□□□ -0.74
DDX39A-217ENST00000592391 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
DDX39A-217ENST00000592391 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
DDX39A-217ENST00000592391 NDUFB4O95168 129 aa10.44□□□□□ -0.74
DDX39A-217ENST00000592391 INSP01308 110 aa10.44□□□□□ -0.74
DDX39A-217ENST00000592391 FFAR4Q5NUL3 377 aa10.44□□□□□ -0.74
DDX39A-217ENST00000592391 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms