RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	PRR20A	P86496	221 aa		11.78	□□□□□ -0.52
TMC6-222	ENST00000592076	TMEM37	Q8WXS4	190 aa		11.78	□□□□□ -0.52
TMC6-222	ENST00000592076	TMEM208	Q9BTX3	173 aa		11.78	□□□□□ -0.52
TMC6-222	ENST00000592076	SLC35B3	Q9H1N7	401 aa		11.78	□□□□□ -0.52
TMC6-222	ENST00000592076	KCNIP2	Q9NS61	270 aa		11.78	□□□□□ -0.52
TMC6-222	ENST00000592076	TRAV8-2	A0A0B4J237	113 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	PTTG1	O95997	202 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	AMBP	P02760	352 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	RBMY1A1	P0DJD3	496 aa	Known RBP	11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	RBMY1C	P0DJD4	496 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	CXCL3	P19876	107 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	CNN1	P51911	297 aa	Known RBP	11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	H2BFS	P57053	126 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	HIST1H1A	Q02539	215 aa	Predicted RBP	11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	NHLH2	Q02577	135 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	CLINT1	Q14677	625 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	RBMY1F	Q15415	496 aa	Known RBP	11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF709	Q8N972	641 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	C17orf77	Q96MU5	243 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	NPCDR1	Q9BY65	106 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	HRH4	Q9H3N8	390 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	RYR3	Q15413	4870 aa		11.77	□□□□□ -0.53
TMC6-222	ENST00000592076	CSMD3	Q7Z407	3707 aa		11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	SMIM9	A6NGZ8	99 aa		11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	RHOB	P62745	196 aa		11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	PSG3	Q16557	428 aa		11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	THAP6	Q8TBB0	222 aa		11.76	□□□□□ -0.53
TMC6-222	ENST00000592076	TMEM189	A5PLL7	270 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	C11orf94	C9JXX5	98 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	C17orf112	F2Z3M2	114 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	MRPS12	O15235	138 aa	Known RBP	11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	MPC2	O95563	127 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	INS	P01308	110 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	HBE1	P02100	147 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	SNRPC	P09234	159 aa	Known RBP	11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	HLA-DMB	P28068	263 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	C2CD4C	Q8TF44	421 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	CHAC2	Q8WUX2	184 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	RPUSD4	Q96CM3	377 aa	Known RBP	11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	NEU1	Q99519	415 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	RFNG	Q9Y644	331 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076	SACS	Q9NZJ4	4579 aa		11.75	□□□□□ -0.53
TMC6-222	ENST00000592076		H0YIZ8	118 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	LY6G6C	O95867	125 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF705D	P0CH99	300 aa	Predicted RBP	11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF705B	P0CI00	300 aa	Predicted RBP	11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	EMP1	P54849	157 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	GUK1	Q16774	197 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	SPINK13	Q1W4C9	94 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	OR11H7	Q8NGC8	314 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	OR8A1	Q8NGG7	326 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	IGF2BP2-AS1	Q96M15	143 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	ALG5	Q9Y673	324 aa		11.74	□□□□□ -0.53
TMC6-222	ENST00000592076	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.73	□□□□□ -0.53
TMC6-222	ENST00000592076		H3BTX0	84 aa		11.73	□□□□□ -0.53
TMC6-222	ENST00000592076	BOLA2-SMG1P6	H3BVE0	249 aa		11.73	□□□□□ -0.53
TMC6-222	ENST00000592076	MORN5	Q5VZ52	161 aa		11.73	□□□□□ -0.53
TMC6-222	ENST00000592076	LINC00476	Q8WZB0	136 aa		11.73	□□□□□ -0.53
TMC6-222	ENST00000592076	MBD2	Q9UBB5	411 aa		11.73	□□□□□ -0.53
TMC6-222	ENST00000592076	TRAV10	A0A0B4J240	114 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	TRAV5	A0A0B4J249	113 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	TEX48	A0A1B0GUV7	120 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076		A8MTW9	85 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076		M0R2Z0	102 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	IFNA5	P01569	189 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	IGLC2	P0DOY2	106 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	RRN3P1	Q2M238	152 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	AMTN	Q6UX39	209 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	OR10J6P	Q8NGY7	276 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	SCGB1C1	Q8TD33	95 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	ATP5S	Q99766	215 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	WDR61	Q9GZS3	305 aa	Known RBP	11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	HSPB11	Q9Y547	144 aa		11.72	□□□□□ -0.53
TMC6-222	ENST00000592076	SLC17A3	O00476	420 aa		11.71	□□□□□ -0.53
TMC6-222	ENST00000592076	SPART-AS1	P0CW21	52 aa		11.71	□□□□□ -0.53
TMC6-222	ENST00000592076	RPL12	P30050	165 aa	Known RBP	11.71	□□□□□ -0.53
TMC6-222	ENST00000592076		Q6ZTC4	211 aa		11.71	□□□□□ -0.53
TMC6-222	ENST00000592076	MED28	Q9H204	178 aa		11.71	□□□□□ -0.53
TMC6-222	ENST00000592076	TIMM9	Q9Y5J7	89 aa		11.71	□□□□□ -0.53
TMC6-222	ENST00000592076	RYR2	Q92736	4967 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	LOC102723971	A0A1B0GUV8	181 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	IGLL5	B9A064	214 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076		H3BQ15	152 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	TCTA	P57738	103 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	BAP18	Q8IXM2	172 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	C1orf158	Q8N1D5	194 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	RNF126	Q9BV68	326 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	SMIM3	Q9BZL3	60 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	TMEM14C	Q9P0S9	112 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	CELA1	Q9UNI1	258 aa		11.7	□□□□□ -0.54
TMC6-222	ENST00000592076	ALMS1	Q8TCU4	4167 aa		11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	ZNF253	O75346	499 aa		11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	HIST1H1E	P10412	219 aa	Known RBP	11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	GCSAML	Q5JQS6	135 aa		11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	ZNF767P	Q75MW2	155 aa		11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	MRPL32	Q9BYC8	188 aa	Known RBP	11.69	□□□□□ -0.54
TMC6-222	ENST00000592076	TRAV12-2	A0A075B6T6	113 aa		11.68	□□□□□ -0.54
TMC6-222	ENST00000592076	PRB4	P10163	310 aa	Predicted RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms