RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 RPL29P47914 159 aaKnown RBP8.73□□□□□ -1.01
TPM4-212ENST00000590180 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
TPM4-212ENST00000590180 EMP1P54849 157 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 B2MP61769 119 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 RHOBP62745 196 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PRR20EP86478 221 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PRR20CP86479 221 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PRR20DP86480 221 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PRR20BP86481 221 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PRR20AP86496 221 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 OPCMLQ14982 345 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 PSG3Q16557 428 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 OR5C1Q8NGR4 320 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 GOLT1BQ9Y3E0 138 aa8.73□□□□□ -1.01
TPM4-212ENST00000590180 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 MRPS12O15235 138 aaKnown RBP8.72□□□□□ -1.01
TPM4-212ENST00000590180 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
TPM4-212ENST00000590180 H2BFSP57053 126 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 HIST1H1AQ02539 215 aaPredicted RBP8.72□□□□□ -1.01
TPM4-212ENST00000590180 CLINT1Q14677 625 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 MORN5Q5VZ52 161 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 ZNF705AQ6ZN79 300 aaPredicted RBP8.72□□□□□ -1.01
TPM4-212ENST00000590180 ZNF709Q8N972 641 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 THAP6Q8TBB0 222 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 PPP1R1CQ8WVI7 109 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 PFDN5Q99471 154 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 TMEM208Q9BTX3 173 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 HRH4Q9H3N8 390 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
TPM4-212ENST00000590180 RYR3Q15413 4870 aa8.71□□□□□ -1.01
TPM4-212ENST00000590180 MPDU1O75352 247 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 LCN15Q6UWW0 184 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 ZNF767PQ75MW2 155 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 OR11H7Q8NGC8 314 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 C2CD4CQ8TF44 421 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 CHAC2Q8WUX2 184 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 RPUSD4Q96CM3 377 aaKnown RBP8.71□□□□□ -1.02
TPM4-212ENST00000590180 NEU1Q99519 415 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 RNF126Q9BV68 326 aa8.71□□□□□ -1.02
TPM4-212ENST00000590180 ZNF705FA8MVS1 300 aaPredicted RBP8.7□□□□□ -1.02
TPM4-212ENST00000590180 IGLL5B9A064 214 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 C11orf94C9JXX5 98 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 H3BQ15 152 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 M0R2Z0 102 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 MPC2O95563 127 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 CXCL2P19875 107 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 SPINK13Q1W4C9 94 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 AMTNQ6UX39 209 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 IGF2BP2-AS1Q96M15 143 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 SLC50A1Q9BRV3 221 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 NPCDR1Q9BY65 106 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 ZNF331Q9NQX6 463 aaPredicted RBP8.7□□□□□ -1.02
TPM4-212ENST00000590180 RFNGQ9Y644 331 aa8.7□□□□□ -1.02
TPM4-212ENST00000590180 TMEM189A5PLL7 270 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 A8MTW9 85 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 HBE1P02100 147 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 AMBPP02760 352 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 SPART-AS1P0CW21 52 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 PET100P0DJ07 73 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 RRN3P1Q2M238 152 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 Q6ZTC4 211 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 LINC00476Q8WZB0 136 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 CELA1Q9UNI1 258 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 ALG5Q9Y673 324 aa8.69□□□□□ -1.02
TPM4-212ENST00000590180 TRAV12-2A0A075B6T6 113 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 TRAV10A0A0B4J240 114 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 SLC17A3O00476 420 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 INSP01308 110 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 IGLC2P0DOY2 106 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 RPL12P30050 165 aaKnown RBP8.68□□□□□ -1.02
TPM4-212ENST00000590180 GUK1Q16774 197 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 GCSAMLQ5JQS6 135 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 SCGB1C1Q8TD33 95 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 LINC01587Q99440 93 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 SMIM3Q9BZL3 60 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 ZNF586Q9NXT0 402 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 TIMM9Q9Y5J7 89 aa8.68□□□□□ -1.02
TPM4-212ENST00000590180 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 ZNF705GA8MUZ8 300 aaPredicted RBP8.67□□□□□ -1.02
TPM4-212ENST00000590180 PRAC2D3DTV9 90 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 C17orf112F2Z3M2 114 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 BOLA2-SMG1P6H3BVE0 249 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 PTTG1O95997 202 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 IFNA5P01569 189 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
TPM4-212ENST00000590180 SAT2Q96F10 170 aaPredicted RBP8.67□□□□□ -1.02
TPM4-212ENST00000590180 ATP5SQ99766 215 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 WDR61Q9GZS3 305 aaKnown RBP8.67□□□□□ -1.02
TPM4-212ENST00000590180 MED28Q9H204 178 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 HSPB11Q9Y547 144 aa8.67□□□□□ -1.02
TPM4-212ENST00000590180 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
TPM4-212ENST00000590180 CRXO43186 299 aaPredicted RBP8.66□□□□□ -1.02
TPM4-212ENST00000590180 PRM2P04554 102 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms