RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 F6UB75 175 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 MIFP14174 115 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 PSG9Q00887 426 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 PSG3Q16557 428 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF705AQ6ZN79 300 aaPredicted RBP12.74□□□□□ -0.37
H3F3B-207ENST00000589417 Q8NAQ8 132 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 SAT2Q96F10 170 aaPredicted RBP12.74□□□□□ -0.37
H3F3B-207ENST00000589417 SLC50A1Q9BRV3 221 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 PARD6GQ9BYG4 376 aaPredicted RBP12.74□□□□□ -0.37
H3F3B-207ENST00000589417 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 CLEC5AQ9NY25 188 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
H3F3B-207ENST00000589417 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
H3F3B-207ENST00000589417 DUSP14O95147 198 aaKnown RBP12.73□□□□□ -0.37
H3F3B-207ENST00000589417 FGL1Q08830 312 aa12.73□□□□□ -0.37
H3F3B-207ENST00000589417 GUK1Q16774 197 aa12.73□□□□□ -0.37
H3F3B-207ENST00000589417 NEU1Q99519 415 aa12.73□□□□□ -0.37
H3F3B-207ENST00000589417 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
H3F3B-207ENST00000589417 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 H3BQ15 152 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF253O75346 499 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 GIPP09681 153 aaPredicted RBP12.72□□□□□ -0.37
H3F3B-207ENST00000589417 IGFL4Q6B9Z1 124 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 RNF182Q8N6D2 247 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 OR4B1Q8NGF8 309 aa12.72□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF705FA8MVS1 300 aaPredicted RBP12.71□□□□□ -0.37
H3F3B-207ENST00000589417 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF705DP0CH99 300 aaPredicted RBP12.71□□□□□ -0.37
H3F3B-207ENST00000589417 ZNF705BP0CI00 300 aaPredicted RBP12.71□□□□□ -0.37
H3F3B-207ENST00000589417 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
H3F3B-207ENST00000589417 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
H3F3B-207ENST00000589417 RYR3Q15413 4870 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 IGKV3-20P01619 116 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 AMBPP02760 352 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 RBMY1A1P0DJD3 496 aaKnown RBP12.7□□□□□ -0.38
H3F3B-207ENST00000589417 RBMY1CP0DJD4 496 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
H3F3B-207ENST00000589417 GCSAMLQ5JQS6 135 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 ZNF738Q8NE65 137 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 OR8A1Q8NGG7 326 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 SLC35B3Q9H1N7 401 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 SACSQ9NZJ4 4579 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 TENM2Q9NT68 2774 aa12.7□□□□□ -0.38
H3F3B-207ENST00000589417 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 IFNA5P01569 189 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
H3F3B-207ENST00000589417 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 PDE6HQ13956 83 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 AQP10Q96PS8 301 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
H3F3B-207ENST00000589417 MFFQ9GZY8 342 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 WFDC1Q9HC57 220 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 ZNF586Q9NXT0 402 aa12.69□□□□□ -0.38
H3F3B-207ENST00000589417 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
H3F3B-207ENST00000589417 TRBV19A0A075B6N1 114 aa12.68□□□□□ -0.38
H3F3B-207ENST00000589417 SLC17A3O00476 420 aa12.68□□□□□ -0.38
H3F3B-207ENST00000589417 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
H3F3B-207ENST00000589417 SCGB1C1Q8TD33 95 aa12.68□□□□□ -0.38
H3F3B-207ENST00000589417 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
H3F3B-207ENST00000589417 IGF2BP2-AS1Q96M15 143 aa12.68□□□□□ -0.38
H3F3B-207ENST00000589417 NUPR2A6NF83 97 aa12.67□□□□□ -0.38
H3F3B-207ENST00000589417 Q5BKY6 102 aa12.67□□□□□ -0.38
H3F3B-207ENST00000589417 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
H3F3B-207ENST00000589417 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
H3F3B-207ENST00000589417 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
H3F3B-207ENST00000589417 LYSTQ99698 3801 aa12.67□□□□□ -0.38
H3F3B-207ENST00000589417 SLC25A2Q9BXI2 301 aa12.67□□□□□ -0.38
H3F3B-207ENST00000589417 LCE6AA0A183 80 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 CRXO43186 299 aaPredicted RBP12.66□□□□□ -0.38
H3F3B-207ENST00000589417 FXYD7P58549 80 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 SMIM3Q9BZL3 60 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 TIMM9Q9Y5J7 89 aa12.66□□□□□ -0.38
H3F3B-207ENST00000589417 CXorf65A6NEN9 183 aa12.65□□□□□ -0.38
H3F3B-207ENST00000589417 DEFB4AO15263 64 aa12.65□□□□□ -0.38
H3F3B-207ENST00000589417 NDUFB4O95168 129 aa12.65□□□□□ -0.38
H3F3B-207ENST00000589417 SNRPCP09234 159 aaKnown RBP12.65□□□□□ -0.38
H3F3B-207ENST00000589417 PRELID1Q9Y255 219 aa12.65□□□□□ -0.38
H3F3B-207ENST00000589417 GOLT1BQ9Y3E0 138 aa12.65□□□□□ -0.38
H3F3B-207ENST00000589417 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 H3BTX0 84 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
H3F3B-207ENST00000589417 ZNF266Q14584 549 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
H3F3B-207ENST00000589417 OR51M1Q9H341 326 aa12.64□□□□□ -0.39
H3F3B-207ENST00000589417 NBEAP1P0C6P0 100 aa12.63□□□□□ -0.39
H3F3B-207ENST00000589417 PYYP10082 97 aa12.63□□□□□ -0.39
H3F3B-207ENST00000589417 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
H3F3B-207ENST00000589417 PMS2P11Q13670 270 aa12.63□□□□□ -0.39
H3F3B-207ENST00000589417 KLK5Q9Y337 293 aaPredicted RBP12.63□□□□□ -0.39
H3F3B-207ENST00000589417 RFNGQ9Y644 331 aa12.63□□□□□ -0.39
H3F3B-207ENST00000589417 PRAC2D3DTV9 90 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 G3V3Q6 166 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms