RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 PRAF2O60831 178 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 DUSP14O95147 198 aaKnown RBP14.9□□□□□ -0.02
MBD3-205ENST00000589064 CXCL3P19876 107 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 EMP1P54849 157 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 C12orf74Q32Q52 190 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 MORN5Q5VZ52 161 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 C10orf113Q5VZT2 155 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 Q6ZRG5 221 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 STX12Q86Y82 276 aa14.9□□□□□ -0.02
MBD3-205ENST00000589064 UBE2L5PA0A1B0GUS4 154 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRB4P10163 310 aaPredicted RBP14.89□□□□□ -0.03
MBD3-205ENST00000589064 HBG1P69891 147 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 HBG2P69892 147 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRR20EP86478 221 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRR20CP86479 221 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRR20DP86480 221 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRR20BP86481 221 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PRR20AP86496 221 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 PSG3Q16557 428 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 GOLT1BQ9Y3E0 138 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 TRAV10A0A0B4J240 114 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 RLN2P04090 185 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 BAXQ07812 192 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 OPCMLQ14982 345 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 ATP6V1FQ16864 119 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 BPIFA4PQ86YQ2 179 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 OR11H7Q8NGC8 314 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 RFNGQ9Y644 331 aa14.89□□□□□ -0.03
MBD3-205ENST00000589064 TRAV5A0A0B4J249 113 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 H3BTX0 84 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 RPL29P47914 159 aaKnown RBP14.88□□□□□ -0.03
MBD3-205ENST00000589064 NHLH2Q02577 135 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 RGS21Q2M5E4 152 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 LRRC37A5PQ49AS3 106 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 LGALS9CQ6DKI2 356 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 NMES1Q9C002 83 aa14.88□□□□□ -0.03
MBD3-205ENST00000589064 M0R2Z0 102 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 HIST1H1AQ02539 215 aaPredicted RBP14.87□□□□□ -0.03
MBD3-205ENST00000589064 SPINK13Q1W4C9 94 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 IGF2BP2-AS1Q96M15 143 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 SLC39A9Q9NUM3 307 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 OR5AC2Q9NZP5 309 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 APLNQ9ULZ1 77 aa14.87□□□□□ -0.03
MBD3-205ENST00000589064 TMEM189A5PLL7 270 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 H0YIZ8 118 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 HBE1P02100 147 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 FGF7P21781 194 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 RHOBP62745 196 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 OR1L4Q8NGR5 311 aa14.86□□□□□ -0.03
MBD3-205ENST00000589064 RPUSD4Q96CM3 377 aaKnown RBP14.86□□□□□ -0.03
MBD3-205ENST00000589064 ZNF331Q9NQX6 463 aaPredicted RBP14.86□□□□□ -0.03
MBD3-205ENST00000589064 E5RGE8 158 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 H3BQ15 152 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 AMBPP02760 352 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 SPART-AS1P0CW21 52 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 CXCL2P19875 107 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 TCTAP57738 103 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 B2MP61769 119 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 CYCSP99999 105 aaKnown RBP14.85□□□□□ -0.03
MBD3-205ENST00000589064 LCN15Q6UWW0 184 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 CHAC2Q8WUX2 184 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 TMEM208Q9BTX3 173 aa14.85□□□□□ -0.03
MBD3-205ENST00000589064 CRXO43186 299 aaPredicted RBP14.84□□□□□ -0.03
MBD3-205ENST00000589064 SLC25A31Q9H0C2 315 aa14.84□□□□□ -0.03
MBD3-205ENST00000589064 PPP1R14DQ9NXH3 145 aa14.84□□□□□ -0.03
MBD3-205ENST00000589064 PLA2G2EQ9NZK7 142 aa14.84□□□□□ -0.03
MBD3-205ENST00000589064 PXMP4Q9Y6I8 212 aa14.84□□□□□ -0.03
MBD3-205ENST00000589064 DEFB131BA0A096LNP1 70 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 SLC17A3O00476 420 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 SSNA1O43805 119 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 IGLC2P0DOY2 106 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 H2BFSP57053 126 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 RRN3P1Q2M238 152 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 RPP25LQ8N5L8 163 aaKnown RBP14.83□□□□□ -0.03
MBD3-205ENST00000589064 OR5C1Q8NGR4 320 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 PFDN5Q99471 154 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 SLC50A1Q9BRV3 221 aa14.83□□□□□ -0.03
MBD3-205ENST00000589064 TRAV12-2A0A075B6T6 113 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 LOC102723971A0A1B0GUV8 181 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 PRM2P04554 102 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 BAP18Q8IXM2 172 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 THAP6Q8TBB0 222 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 SAT2Q96F10 170 aaPredicted RBP14.82□□□□□ -0.04
MBD3-205ENST00000589064 DKK2Q9UBU2 259 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 IGHV4-4A0A075B6R2 117 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 ZNF705GA8MUZ8 300 aaPredicted RBP14.82□□□□□ -0.04
MBD3-205ENST00000589064 BOLA2-SMG1P6H3BVE0 249 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 INSP01308 110 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 FAM222AQ5U5X8 452 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 PPP1R1CQ8WVI7 109 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 RNF126Q9BV68 326 aa14.82□□□□□ -0.04
MBD3-205ENST00000589064 PRAC2D3DTV9 90 aa14.81□□□□□ -0.04
MBD3-205ENST00000589064 MPDU1O75352 247 aa14.81□□□□□ -0.04
MBD3-205ENST00000589064 CLINT1Q14677 625 aa14.81□□□□□ -0.04
MBD3-205ENST00000589064 OXA1LQ15070 435 aa14.81□□□□□ -0.04
MBD3-205ENST00000589064 NPCDR1Q9BY65 106 aa14.81□□□□□ -0.04
MBD3-205ENST00000589064 YTHDF2Q9Y5A9 579 aaKnown RBP14.81□□□□□ -0.04
MBD3-205ENST00000589064 GCSAMLQ5JQS6 135 aa14.8□□□□□ -0.04
MBD3-205ENST00000589064 ZNF586Q9NXT0 402 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms