RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
CNN1-208ENST00000588935 MBP02144 154 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 SPP1P10451 314 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 CDC34P49427 236 aaPredicted RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 EIF5AP63241 154 aaKnown RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 BAP18Q8IXM2 172 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 TMED6Q8WW62 240 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 C20orf173Q96LM9 149 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 ASCL2Q99929 193 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 ACTR3CQ9C0K3 210 aaPredicted RBP10.84□□□□□ -0.67
CNN1-208ENST00000588935 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
CNN1-208ENST00000588935 TRAV8-2A0A0B4J237 113 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 SOCS3O14543 225 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 MEOX2P50222 304 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 TAS2R45P59539 299 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 RNF141Q8WVD5 230 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
CNN1-208ENST00000588935 A0A087X0K7 114 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 RBMY1BA6NDE4 496 aaKnown RBP10.82□□□□□ -0.68
CNN1-208ENST00000588935 RBMY1EA6NEQ0 496 aaKnown RBP10.82□□□□□ -0.68
CNN1-208ENST00000588935 BOLA2-SMG1P6H3BVE0 249 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 SLC17A3O00476 420 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 ISLRO14498 428 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 RBMY1DP0C7P1 496 aaKnown RBP10.82□□□□□ -0.68
CNN1-208ENST00000588935 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 IGLC2P0DOY2 106 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
CNN1-208ENST00000588935 C4BPBP20851 252 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 PSMB3P49720 205 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 SSX7Q7RTT5 188 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 ZNF503Q96F45 646 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 HRH4Q9H3N8 390 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 TMEM14CQ9P0S9 112 aa10.82□□□□□ -0.68
CNN1-208ENST00000588935 F6UB75 175 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 IGKV3-20P01619 116 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 FHITP49789 147 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 UBE2L3P68036 154 aaKnown RBP10.81□□□□□ -0.68
CNN1-208ENST00000588935 LCN15Q6UWW0 184 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 SLC51BQ86UW2 128 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 ZNF738Q8NE65 137 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 FXYD5Q96DB9 178 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
CNN1-208ENST00000588935 TRBV19A0A075B6N1 114 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 ZNF705FA8MVS1 300 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 ZNF705DP0CH99 300 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 ZNF705BP0CI00 300 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 ARL14EPLP0DKL9 152 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 FGF8P55075 233 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 ZNF726P1Q15940 193 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 STOML3Q8TAV4 291 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 FAM213BQ8TBF2 198 aa10.8□□□□□ -0.68
CNN1-208ENST00000588935 SAT2Q96F10 170 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
CNN1-208ENST00000588935 LOC102724200A0A096LPH7 203 aaPredicted RBP10.79□□□□□ -0.68
CNN1-208ENST00000588935 A0A1B0GV50 99 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 NDUFB4O95168 129 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
CNN1-208ENST00000588935 PSG3Q16557 428 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 GUK1Q16774 197 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 STHQ8IWL8 128 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 FAM110AQ9BQ89 295 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 SLC50A1Q9BRV3 221 aa10.79□□□□□ -0.68
CNN1-208ENST00000588935 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 STAG3L3P0CL85 134 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 GCHFRP30047 84 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 ICAM4Q14773 271 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 PQLC2Q6ZP29 291 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 OR4B1Q8NGF8 309 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 PHYHIPLQ96FC7 376 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 TMPRSS5Q9H3S3 457 aa10.78□□□□□ -0.68
CNN1-208ENST00000588935 CXorf1O96002 111 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 FXYD7P58549 80 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 PSG9Q00887 426 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 FAM74A1Q5RGS3 127 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 EIF5AL1Q6IS14 154 aaKnown RBP10.77□□□□□ -0.69
CNN1-208ENST00000588935 SBSPONQ8IVN8 264 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 RPUSD4Q96CM3 377 aaKnown RBP10.77□□□□□ -0.69
CNN1-208ENST00000588935 AAMDCQ9H7C9 122 aa10.77□□□□□ -0.69
CNN1-208ENST00000588935 MAP1LC3B2A6NCE7 125 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 A8MZ25 164 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 UMAD1C9J7I0 102 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 M0R3E3 92 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 HAGHQ16775 308 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 ALKAL2Q6UX46 152 aa10.76□□□□□ -0.69
CNN1-208ENST00000588935 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms