RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 C9orf62Q8N4C0 152 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 RPP25LQ8N5L8 163 aaKnown RBP14.56□□□□□ -0.08
CIRBP-220ENST00000588917 FAM167A-AS1Q96KT0 104 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 SLC50A1Q9BRV3 221 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 SLC25A2Q9BXI2 301 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 RPRMQ9NS64 109 aa14.56□□□□□ -0.08
CIRBP-220ENST00000588917 SOCS3O14543 225 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 OR7C2O60412 319 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 ZNF253O75346 499 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 CDC34P49427 236 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-220ENST00000588917 PDE6HQ13956 83 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 PSMG4Q5JS54 123 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 SPATA31B1PQ5VZV4 182 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 PQLC2Q6ZP29 291 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 RNF141Q8WVD5 230 aa14.55□□□□□ -0.08
CIRBP-220ENST00000588917 FAM24BQ8N5W8 94 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 RAB24Q969Q5 203 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 C17orf77Q96MU5 243 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 LINC00052Q96N35 136 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 SRD5A3Q9H8P0 318 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 DNAH3Q8TD57 4116 aa14.54□□□□□ -0.08
CIRBP-220ENST00000588917 H3BQ15 152 aa14.53□□□□□ -0.08
CIRBP-220ENST00000588917 NBEAP1P0C6P0 100 aa14.53□□□□□ -0.08
CIRBP-220ENST00000588917 PSG9Q00887 426 aa14.53□□□□□ -0.08
CIRBP-220ENST00000588917 APRG1Q8IVJ8 170 aa14.53□□□□□ -0.08
CIRBP-220ENST00000588917 SAT2Q96F10 170 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-220ENST00000588917 ZNF586Q9NXT0 402 aa14.53□□□□□ -0.08
CIRBP-220ENST00000588917 TRBV19A0A075B6N1 114 aa14.52□□□□□ -0.09
CIRBP-220ENST00000588917 STAG3L2P0CL84 134 aa14.52□□□□□ -0.09
CIRBP-220ENST00000588917 STAG3L3P0CL85 134 aa14.52□□□□□ -0.09
CIRBP-220ENST00000588917 PYYP10082 97 aa14.52□□□□□ -0.09
CIRBP-220ENST00000588917 ZNF331Q9NQX6 463 aaPredicted RBP14.52□□□□□ -0.09
CIRBP-220ENST00000588917 LOC102724200A0A096LPH7 203 aaPredicted RBP14.51□□□□□ -0.09
CIRBP-220ENST00000588917 CTXND1A0A1B0GTU2 59 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 CXorf1O96002 111 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 RAB5CP51148 216 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 PSG3Q16557 428 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 DPPA3Q6W0C5 159 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 STHQ8IWL8 128 aa14.51□□□□□ -0.09
CIRBP-220ENST00000588917 FRMD6-AS1P0C7T7 363 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 UBE2L3P68036 154 aaKnown RBP14.5□□□□□ -0.09
CIRBP-220ENST00000588917 EBLN2Q6P2I7 272 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 LYPD1Q8N2G4 141 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 BLNKQ8WV28 456 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 FXYD5Q96DB9 178 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 WFDC10AQ9H1F0 79 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 AAMDCQ9H7C9 122 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 PRELID1Q9Y255 219 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 NBEAL2Q6ZNJ1 2754 aa14.5□□□□□ -0.09
CIRBP-220ENST00000588917 TRAV8-2A0A0B4J237 113 aa14.49□□□□□ -0.09
CIRBP-220ENST00000588917 SNRPCP09234 159 aaKnown RBP14.49□□□□□ -0.09
CIRBP-220ENST00000588917 LINC00322Q6ZN03 302 aaPredicted RBP14.49□□□□□ -0.09
CIRBP-220ENST00000588917 FOXI2Q6ZQN5 318 aa14.49□□□□□ -0.09
CIRBP-220ENST00000588917 TMED6Q8WW62 240 aa14.49□□□□□ -0.09
CIRBP-220ENST00000588917 OR10J4P0C629 311 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 NKX2-5P52952 324 aaPredicted RBP14.48□□□□□ -0.09
CIRBP-220ENST00000588917 APOC4P55056 127 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 ZNF503Q96F45 646 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 CITED4Q96RK1 184 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 B9D2Q9BPU9 175 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 TMEM167BQ9NRX6 74 aa14.48□□□□□ -0.09
CIRBP-220ENST00000588917 KIR2DL5BA0A0G2JN68 375 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 KIR2DL5BA0A0G2JPC4 375 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 RBMY1BA6NDE4 496 aaKnown RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 RBMY1EA6NEQ0 496 aaKnown RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 H3BTX0 84 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 HMGB3O15347 200 aaKnown RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 RBMY1DP0C7P1 496 aaKnown RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 ARL14EPLP0DKL9 152 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 ZNF124Q15973 351 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 ACTL10Q5JWF8 245 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 KIR2DL5AQ8N109 375 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 RNF182Q8N6D2 247 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 ZNF738Q8NE65 137 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 KIR2DL5BQ8NHK3 375 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 MRPL53Q96EL3 112 aaKnown RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 PHYHIPLQ96FC7 376 aa14.47□□□□□ -0.09
CIRBP-220ENST00000588917 SAV1Q9H4B6 383 aaPredicted RBP14.47□□□□□ -0.09
CIRBP-220ENST00000588917 DUSP14O95147 198 aaKnown RBP14.46□□□□□ -0.09
CIRBP-220ENST00000588917 NDUFB4O95168 129 aa14.46□□□□□ -0.09
CIRBP-220ENST00000588917 NUTF2P61970 127 aaKnown RBP14.46□□□□□ -0.09
CIRBP-220ENST00000588917 FAM74A1Q5RGS3 127 aa14.46□□□□□ -0.09
CIRBP-220ENST00000588917 IGFL4Q6B9Z1 124 aa14.46□□□□□ -0.09
CIRBP-220ENST00000588917 C20orf173Q96LM9 149 aa14.46□□□□□ -0.09
CIRBP-220ENST00000588917 CLUHP3Q96NS8 147 aa14.46□□□□□ -0.09
CIRBP-220ENST00000588917 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 H3BMM0 161 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 SLC17A3O00476 420 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 UBE2CO00762 179 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 HLA-DRB4P13762 266 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 GCHFRP30047 84 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 RANP62826 216 aaKnown RBP14.45□□□□□ -0.1
CIRBP-220ENST00000588917 ZNF726P1Q15940 193 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 MORN3Q6PF18 240 aaPredicted RBP14.45□□□□□ -0.1
CIRBP-220ENST00000588917 FAM213BQ8TBF2 198 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 SUN5Q8TC36 379 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 RPUSD4Q96CM3 377 aaKnown RBP14.45□□□□□ -0.1
CIRBP-220ENST00000588917 HLA-DRB4X5D2U9 266 aa14.45□□□□□ -0.1
CIRBP-220ENST00000588917 A0A0J9YX75 114 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms