RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SLC25A39Q9BZJ4 359 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-208ENST00000588667 MEF2BQ02080 365 aaPredicted RBP15.21■□□□□ 0.03
ATG4D-208ENST00000588667 ZFAND3Q9H8U3 227 aa15.21■□□□□ 0.03
ATG4D-208ENST00000588667 RNF24Q9Y225 148 aa15.21■□□□□ 0.03
ATG4D-208ENST00000588667 F8W036 122 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 PAGE4O60829 102 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 USF2Q15853 346 aaPredicted RBP15.21■□□□□ 0.02
ATG4D-208ENST00000588667 DEFB114Q30KQ6 69 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 CD300EQ496F6 205 aaPredicted RBP15.21■□□□□ 0.02
ATG4D-208ENST00000588667 ZNF503Q96F45 646 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 PRR25Q96S07 402 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 TXNDC17Q9BRA2 123 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 SHANK2-AS3Q9BTD1 123 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 PAXXQ9BUH6 204 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 OR51M1Q9H341 326 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 ARL2-SNX15V9GYD0 113 aa15.21■□□□□ 0.02
ATG4D-208ENST00000588667 ZNF207O43670 478 aaKnown RBP15.2■□□□□ 0.02
ATG4D-208ENST00000588667 UBE2L3P68036 154 aaKnown RBP15.2■□□□□ 0.02
ATG4D-208ENST00000588667 SEC11CQ9BY50 192 aa15.2■□□□□ 0.02
ATG4D-208ENST00000588667 MLXQ9UH92 298 aa15.2■□□□□ 0.02
ATG4D-208ENST00000588667 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
ATG4D-208ENST00000588667 H3BRN7 92 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 K7EIL1 84 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 NDUFS6O75380 124 aaKnown RBP15.19■□□□□ 0.02
ATG4D-208ENST00000588667 SRP19P09132 144 aaKnown RBP15.19■□□□□ 0.02
ATG4D-208ENST00000588667 OR10J4P0C629 311 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 GP9P14770 177 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 UBE2G2P60604 165 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 SUN5Q8TC36 379 aa15.19■□□□□ 0.02
ATG4D-208ENST00000588667 CST9LP1Q5W188 147 aa15.18■□□□□ 0.02
ATG4D-208ENST00000588667 MRAPQ8TCY5 172 aa15.18■□□□□ 0.02
ATG4D-208ENST00000588667 IGHV7-4-1A0A0J9YVY3 117 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 IZUMO1RA6ND01 250 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 C11orf94C9JXX5 98 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 TMEM14CQ9P0S9 112 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 PYYP10082 97 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 ADCYAP1P18509 176 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 CD81P60033 236 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 SOHLH1Q5JUK2 328 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 C10orf91Q5T1B1 145 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 LEMD1Q68G75 181 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 TMEM61Q8N0U2 210 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 FXYD5Q96DB9 178 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 SMPXQ9UHP9 88 aa15.17■□□□□ 0.02
ATG4D-208ENST00000588667 CARHSP1Q9Y2V2 147 aaKnown RBP15.17■□□□□ 0.02
ATG4D-208ENST00000588667 ZNF98A6NK75 572 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 FAM74A7A6NL05 159 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 PDE6DO43924 150 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 APOC3P02656 99 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 BPIFA4PQ86YQ2 179 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 CYB561D1Q8N8Q1 229 aa15.16■□□□□ 0.02
ATG4D-208ENST00000588667 A0A1W2PRE2 83 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 TMEM250H0YL14 139 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 BMI1P35226 326 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 CEBPGP53567 150 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 METTL26Q96S19 204 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 RHPN1-AS1Q9BWJ2 59 aa15.15■□□□□ 0.02
ATG4D-208ENST00000588667 YTHDF2Q9Y5A9 579 aaKnown RBP15.15■□□□□ 0.02
ATG4D-208ENST00000588667 TRAV25A0A0B4J276 109 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 CHEK1O14757 476 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 NKX6-2Q9C056 277 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-208ENST00000588667 SELENOKQ9Y6D0 94 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 IGHV3-49A0A0A0MS15 119 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 F6UZH7 168 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 NPPCP23582 126 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 ATP5G3P48201 142 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 RBPMS2Q6ZRY4 209 aaKnown RBP15.14■□□□□ 0.01
ATG4D-208ENST00000588667 SVBPQ8N300 66 aa15.14■□□□□ 0.01
ATG4D-208ENST00000588667 ZNF785A8K8V0 405 aa15.13■□□□□ 0.01
ATG4D-208ENST00000588667 NBEAP1P0C6P0 100 aa15.13■□□□□ 0.01
ATG4D-208ENST00000588667 HIST1H1EP10412 219 aaKnown RBP15.13■□□□□ 0.01
ATG4D-208ENST00000588667 CRYBB3P26998 211 aa15.13■□□□□ 0.01
ATG4D-208ENST00000588667 GUCA2BQ16661 112 aa15.13■□□□□ 0.01
ATG4D-208ENST00000588667 RPL7P18124 248 aaKnown RBP15.12■□□□□ 0.01
ATG4D-208ENST00000588667 GTSCR1Q86UQ5 136 aa15.12■□□□□ 0.01
ATG4D-208ENST00000588667 IGHV3OR16-13A0A075B7E8 117 aa15.11■□□□□ 0.01
ATG4D-208ENST00000588667 IGHV3-74A0A0B4J1X5 117 aa15.11■□□□□ 0.01
ATG4D-208ENST00000588667 A0A1W2PS18 150 aa15.11■□□□□ 0.01
ATG4D-208ENST00000588667 TSPAN4O14817 238 aa15.11■□□□□ 0.01
ATG4D-208ENST00000588667 APOHP02749 345 aaPredicted RBP15.1■□□□□ 0.01
ATG4D-208ENST00000588667 DEFB121Q5J5C9 76 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 FAM90A2PQ658T7 463 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 OR8I2Q8N0Y5 310 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 BLNKQ8WV28 456 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 SPAG8Q99932 426 aaPredicted RBP15.1■□□□□ 0.01
ATG4D-208ENST00000588667 C1orf194Q5T5A4 169 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 GPR82Q96P67 336 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 SMAD5-AS1Q9Y6J3 95 aa15.1■□□□□ 0.01
ATG4D-208ENST00000588667 GGTLC3B5MD39 225 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 BUB3O43684 328 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 SNAPINO95295 136 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 IGLC2P0DOY2 106 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 SUMO1P63165 101 aaKnown RBP15.09■□□□□ 0.01
ATG4D-208ENST00000588667 FAM74A3Q4VXF1 159 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 CCDC28AQ8IWP9 274 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 Q8N1Y9 231 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 U3KQE9 123 aa15.09■□□□□ 0.01
ATG4D-208ENST00000588667 IGHV3-66A0A0C4DH42 116 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 H3BQ15 152 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 MRPS12O15235 138 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms