RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 NANOS2P60321 138 aaKnown RBP7.92□□□□□ -1.14
CLIP3-203ENST00000586457 HIST1H1AQ02539 215 aaPredicted RBP7.92□□□□□ -1.14
CLIP3-203ENST00000586457 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
CLIP3-203ENST00000586457 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 C20orf173Q96LM9 149 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 NPCDR1Q9BY65 106 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 SLC35B3Q9H1N7 401 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 ALG5Q9Y673 324 aa7.92□□□□□ -1.14
CLIP3-203ENST00000586457 LCE6AA0A183 80 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 TMEM189A5PLL7 270 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 ZNF705EA8MWA4 302 aaPredicted RBP7.91□□□□□ -1.14
CLIP3-203ENST00000586457 HBE1P02100 147 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 GIG44P09565 113 aaPredicted RBP7.91□□□□□ -1.14
CLIP3-203ENST00000586457 CXCL3P19876 107 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 CNN1P51911 297 aaKnown RBP7.91□□□□□ -1.14
CLIP3-203ENST00000586457 EMP1P54849 157 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 PRR20EP86478 221 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 PRR20CP86479 221 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 PRR20DP86480 221 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 PRR20BP86481 221 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 PRR20AP86496 221 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 OPCMLQ14982 345 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 CHAC2Q8WUX2 184 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 RPUSD4Q96CM3 377 aaKnown RBP7.91□□□□□ -1.14
CLIP3-203ENST00000586457 ATP5SQ99766 215 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
CLIP3-203ENST00000586457 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
CLIP3-203ENST00000586457 TRAV8-2A0A0B4J237 113 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 TRAV5A0A0B4J249 113 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 C11orf94C9JXX5 98 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 H3BTX0 84 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 INSP01308 110 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 ZNF705DP0CH99 300 aaPredicted RBP7.9□□□□□ -1.14
CLIP3-203ENST00000586457 ZNF705BP0CI00 300 aaPredicted RBP7.9□□□□□ -1.14
CLIP3-203ENST00000586457 SPART-AS1P0CW21 52 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 Q8NAQ8 132 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 CSNK1G2-AS1Q8NCQ2 148 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 C2CD4CQ8TF44 421 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 AAMDCQ9H7C9 122 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 MBD2Q9UBB5 411 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 HSPB11Q9Y547 144 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 RFNGQ9Y644 331 aa7.9□□□□□ -1.14
CLIP3-203ENST00000586457 H0YIZ8 118 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 LY6G6CO95867 125 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 RBMY1A1P0DJD3 496 aaKnown RBP7.89□□□□□ -1.15
CLIP3-203ENST00000586457 RBMY1CP0DJD4 496 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 TSPOP30536 169 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
CLIP3-203ENST00000586457 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 OR8A1Q8NGG7 326 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 BLNKQ8WV28 456 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 IGF2BP2-AS1Q96M15 143 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 C17orf77Q96MU5 243 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 RNF126Q9BV68 326 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 WDR61Q9GZS3 305 aaKnown RBP7.89□□□□□ -1.15
CLIP3-203ENST00000586457 ZNF331Q9NQX6 463 aaPredicted RBP7.89□□□□□ -1.15
CLIP3-203ENST00000586457 X6R8D5 127 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 AGRNO00468 2067 aa7.89□□□□□ -1.15
CLIP3-203ENST00000586457 M0R2Z0 102 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 HIST1H1EP10412 219 aaKnown RBP7.88□□□□□ -1.15
CLIP3-203ENST00000586457 HTN1P15515 57 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 FFAR4Q5NUL3 377 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 MORN5Q5VZ52 161 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 INO80EQ8NBZ0 244 aaPredicted RBP7.88□□□□□ -1.15
CLIP3-203ENST00000586457 OR11H7Q8NGC8 314 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 LINC01587Q99440 93 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 NEU1Q99519 415 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
CLIP3-203ENST00000586457 TENM2Q9NT68 2774 aa7.88□□□□□ -1.15
CLIP3-203ENST00000586457 TRAV10A0A0B4J240 114 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 A0A1W2PPV4 95 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 ZNF705FA8MVS1 300 aaPredicted RBP7.87□□□□□ -1.15
CLIP3-203ENST00000586457 IGLL5B9A064 214 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 H3BQ15 152 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 BOLA2-SMG1P6H3BVE0 249 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 OR7C2O60412 319 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 TAS2R45P59539 299 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 ZNF705AQ6ZN79 300 aaPredicted RBP7.87□□□□□ -1.15
CLIP3-203ENST00000586457 ASB13Q8WXK3 278 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 OR51M1Q9H341 326 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 TMEM14CQ9P0S9 112 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 PRELID1Q9Y255 219 aa7.87□□□□□ -1.15
CLIP3-203ENST00000586457 TRBV19A0A075B6N1 114 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 TRAV12-2A0A075B6T6 113 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 LOC102723971A0A1B0GUV8 181 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 MRPS12O15235 138 aaKnown RBP7.86□□□□□ -1.15
CLIP3-203ENST00000586457 ZNF253O75346 499 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 CDKN1BP46527 198 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 CSN1S1P47710 185 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 TCTAP57738 103 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 PDE6HQ13956 83 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 ZNF266Q14584 549 aa7.86□□□□□ -1.15
CLIP3-203ENST00000586457 FCN2Q15485 313 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 976.2 ms