RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
LIG3-204ENST00000585740 RPH3ALQ9UNE2 315 aa8.78□□□□□ -1
LIG3-204ENST00000585740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.78□□□□□ -18e-8■■■■□ 23.7
LIG3-204ENST00000585740 A0A096LNT2 108 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 XKRY2A2RUG3 117 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 H3BUX3 64 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 IGHV3-23P01764 117 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 IGHG2P01859 326 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 GPR183P32249 361 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 CT83Q5H943 113 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 SIGLEC15Q6ZMC9 328 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 TMEM183AQ8IXX5 376 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 OR4B1Q8NGF8 309 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 MBD6Q96DN6 1003 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
LIG3-204ENST00000585740 C12orf57Q99622 126 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 GNB1LQ9BYB4 327 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 ZNF580Q9UK33 172 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
LIG3-204ENST00000585740 G3V318 75 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 H3BTX0 84 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 AMY1AP04745 511 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 CLEC3BP05452 202 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 SNRPCP09234 159 aaKnown RBP8.76□□□□□ -1.01
LIG3-204ENST00000585740 ADMP35318 185 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 C9orf152Q5JTZ5 239 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 C1orf194Q5T5A4 169 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 TOMM20LQ6UXN7 152 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 Q86TA4 180 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 EXOC3-AS1Q8N2X6 119 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 NUDT10Q8NFP7 164 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 NRGNQ92686 78 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 NUDT11Q96G61 164 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
LIG3-204ENST00000585740 A0A087X0K7 114 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 LINC01548A6NM66 108 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 A8MWL6 223 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 LY6EQ16553 131 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 DEFB113Q30KQ7 82 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 GOLT1AQ6ZVE7 132 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 NHLRC2Q8NBF2 726 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 CCDC140Q96MF4 163 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
LIG3-204ENST00000585740 RPP21Q9H633 154 aaKnown RBP8.75□□□□□ -1.01
LIG3-204ENST00000585740 GNB4Q9HAV0 340 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 ZNF331Q9NQX6 463 aaPredicted RBP8.75□□□□□ -1.01
LIG3-204ENST00000585740 NAT8BQ9UHF3 227 aa8.75□□□□□ -1.01
LIG3-204ENST00000585740 SOX21Q9Y651 276 aaPredicted RBP8.75□□□□□ -1.01
LIG3-204ENST00000585740 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 FAM231BA6NCW3 169 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 SH2D7A6NKC9 451 aaPredicted RBP8.74□□□□□ -1.01
LIG3-204ENST00000585740 SNURFLB1AK76 121 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 DIRC3C9JPN6 131 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 P01737 135 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 TRGV3P03979 118 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 IER3P46695 156 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 PSG3Q16557 428 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 FAM209BQ5JX69 171 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 PRSS57Q6UWY2 283 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 OR5R1Q8NH85 324 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 WIPF2Q8TF74 440 aaPredicted RBP8.74□□□□□ -1.01
LIG3-204ENST00000585740 MS4A10Q96PG2 267 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 METTL26Q96S19 204 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 SLC50A1Q9BRV3 221 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 PRSS22Q9GZN4 317 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 PSG8Q9UQ74 426 aa8.74□□□□□ -1.01
LIG3-204ENST00000585740 A0A0G2JLM5 398 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 AVPP01185 164 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 TPPP2P59282 170 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 PRNTQ86SH4 94 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 C17orf77Q96MU5 243 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 GPR61Q9BZJ8 451 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 CLEC5AQ9NY25 188 aa8.73□□□□□ -1.01
LIG3-204ENST00000585740 ZNF469Q96JG9 3925 aaPredicted RBP8.72□□□□□ -1.01
LIG3-204ENST00000585740 IFITM10A6NMD0 228 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 ZNF785A8K8V0 405 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 BUB3O43684 328 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 TGFAP01135 160 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 IGLV2-11P01706 119 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 CBLN1P23435 193 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 PPIFP30405 207 aaKnown RBP8.72□□□□□ -1.01
LIG3-204ENST00000585740 TCL1AP56279 114 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 S100A12P80511 92 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 TMEM136Q6ZRR5 245 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 C9orf139Q6ZV77 190 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 TEX29Q8N6K0 151 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 TMEM18Q96B42 140 aa8.72□□□□□ -1.01
LIG3-204ENST00000585740 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
LIG3-204ENST00000585740 TMEM89A2RUT3 159 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms