RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 EBI3Q14213 229 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TNXAQ16473 311 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 OR1B1Q8NGR6 318 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 C18orf32Q8TCD1 76 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MRPL36Q9P0J6 103 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FBXL7Q9UJT9 491 aa11.8□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PGPA6NDG6 321 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 EREGO14944 169 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NBR2O15453 112 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SPINK4O60575 86 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 FAM106CPP0CH98 169 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 TMEM11P17152 192 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ORM2P19652 201 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PLGLAQ15195 96 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
CDK5RAP3-236ENST00000584991 A0A1B0GXF2 115 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 LTAP01374 205 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 GP9P14770 177 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ZNF705AQ6ZN79 300 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 Q8N6K4 173 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NPBQ8NG41 125 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 HIGD1CA8MV81 97 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 NDUFA3O95167 84 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CTRLP40313 264 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SLC35B1P78383 322 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 SLAQ13239 276 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 KIAA1644Q3SXP7 199 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 S100A7AQ86SG5 101 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 Q8N976 141 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 RPP21Q9H633 154 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 ITPR3Q14573 2671 aa11.78□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CREBBPQ92793 2442 aa11.77□□□□□ -0.52
CDK5RAP3-236ENST00000584991 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.52
CDK5RAP3-236ENST00000584991 C20orf202A1L168 122 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 C19orf71A6NCJ1 209 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 NCBP2LA6PVI3 153 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TCRAP04437 139 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 KRTDAPP60985 99 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 NIT1Q86X76 327 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 RCHY1Q96PM5 261 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 AKAP9Q99996 3911 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ZANQ9Y493 2812 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ZFHX3Q15911 3703 aa11.77□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 CD33P20138 364 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ALKBH7Q9BT30 221 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 FAM103A1Q9BTL3 118 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 HBBP68871 147 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TDRG1Q3Y452 100 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 Q9H3A6 140 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 PAM16Q9Y3D7 125 aa11.76□□□□□ -0.53
CDK5RAP3-236ENST00000584991 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 HSBP1O75506 76 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 P01737 135 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 C3orf79P0CE67 100 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 PIFOQ8TCI5 191 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 UQCR10Q9UDW1 63 aa11.75□□□□□ -0.53
CDK5RAP3-236ENST00000584991 I3L2K1 104 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 FSHBP01225 129 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 IGHV3-48P01763 117 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 PMCHP20382 165 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 SRSF12Q8WXF0 261 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 CNIH1O95406 144 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 GNG5P63218 68 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 GAGE1Q13065 139 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 Q8N9W7 124 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 CHCHD1Q96BP2 118 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 RASL11BQ9BPW5 248 aa11.74□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TRAV30A0A087WSZ9 112 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 PSG1P11464 419 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 SPATA45Q537H7 98 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TMEM219Q86XT9 240 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 SLC25A39Q9BZJ4 359 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ZFP30Q9Y2G7 519 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
CDK5RAP3-236ENST00000584991 H3BUX3 64 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms