RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 LYRM9A8MSI8 78 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 IL7P13232 177 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 HTN1P15515 57 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 B2MP61769 119 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 PATE2Q6UY27 113 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 ZNF546Q86UE3 836 aa14.45□□□□□ -0.1
TOP3A-219ENST00000584887 RPUSD4Q96CM3 377 aaKnown RBP14.45□□□□□ -0.1
TOP3A-219ENST00000584887 FNDC10F2Z333 226 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 L7N2F9 121 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 CCSO14618 274 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 AZU1P20160 251 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 TAS2R30P59541 319 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 VAMP2P63027 116 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 ARL16Q0P5N6 197 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 ZNF846Q147U1 533 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 FCN2Q15485 313 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 RNF212Q495C1 297 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 MITD1Q8WV92 249 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 RNF24Q9Y225 148 aa14.44□□□□□ -0.1
TOP3A-219ENST00000584887 FAM25EA8MYX2 175 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 F5H768 121 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 K7EPK0 472 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 AGPAT2O15120 278 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 COX7A2P2O60397 106 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 MBPP02686 304 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-219ENST00000584887 LINC00305Q7Z4B0 112 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 ATG101Q9BSB4 218 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 C20orf85Q9H1P6 137 aa14.43□□□□□ -0.1
TOP3A-219ENST00000584887 H3BTX0 84 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 TSPOP30536 169 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 BCAP31P51572 246 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 PXDC1Q5TGL8 231 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 Q6ZR54 194 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 TMEM256Q8N2U0 113 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 C15orf53Q8NAA6 179 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 LSM5Q9Y4Y9 91 aaKnown RBP14.42□□□□□ -0.1
TOP3A-219ENST00000584887 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
TOP3A-219ENST00000584887 C7orf66A4D0T2 115 aa14.41□□□□□ -0.1
TOP3A-219ENST00000584887 SOHLH1Q5JUK2 328 aa14.41□□□□□ -0.1
TOP3A-219ENST00000584887 LCN15Q6UWW0 184 aa14.41□□□□□ -0.1
TOP3A-219ENST00000584887 PLAC8L1A1L4L8 177 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 MRPS12O15235 138 aaKnown RBP14.4□□□□□ -0.1
TOP3A-219ENST00000584887 NUDT3O95989 172 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 TAS2R60P59551 318 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 CNPY1Q3B7I2 92 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 MGST2Q99735 147 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 SLC50A1Q9BRV3 221 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 GGACTQ9BVM4 153 aa14.4□□□□□ -0.1
TOP3A-219ENST00000584887 TRAV6A0A075B6T7 132 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 C5orf51A6NDU8 294 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 LYRM1O43325 122 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 CXCL2P19875 107 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 CDKN1BP46527 198 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 CAV2P51636 162 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 C10orf113Q5VZT2 155 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 BPIFA4PQ86YQ2 179 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 C16orf74Q96GX8 76 aa14.39□□□□□ -0.11
TOP3A-219ENST00000584887 PARD6GQ9BYG4 376 aaPredicted RBP14.39□□□□□ -0.11
TOP3A-219ENST00000584887 ZNF331Q9NQX6 463 aaPredicted RBP14.39□□□□□ -0.11
TOP3A-219ENST00000584887 CST7O76096 145 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 ATP5G1P05496 136 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 ATP5G3P48201 142 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 C1orf134Q5TEV5 83 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 MORN5Q5VZ52 161 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 OR10J6PQ8NGY7 276 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 SEC22CQ9BRL7 303 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 KIAA1109Q2LD37 5005 aa14.38□□□□□ -0.11
TOP3A-219ENST00000584887 SLC17A3O00476 420 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 PLA2G10O15496 165 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 CAMLGP49069 296 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 RAB31Q13636 194 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 OPCMLQ14982 345 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 TMEM37Q8WXS4 190 aa14.37□□□□□ -0.11
TOP3A-219ENST00000584887 NOP10Q9NPE3 64 aaKnown RBP14.37□□□□□ -0.11
TOP3A-219ENST00000584887 TIMM8BQ9Y5J9 83 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-219ENST00000584887 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 J3KRW8 73 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 TCRBP04435 133 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 S100A10P60903 97 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 KIR3DS1Q14943 382 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 MIC13Q5XKP0 118 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 NRARPQ7Z6K4 114 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 NUDT15Q9NV35 164 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 PXMP4Q9Y6I8 212 aa14.36□□□□□ -0.11
TOP3A-219ENST00000584887 FAM24AA6NFZ4 105 aa14.35□□□□□ -0.11
TOP3A-219ENST00000584887 CBY3A6NI87 242 aa14.35□□□□□ -0.11
TOP3A-219ENST00000584887 FAM3BP58499 235 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-219ENST00000584887 Q6ZRG5 221 aa14.35□□□□□ -0.11
TOP3A-219ENST00000584887 ZNF431Q8TF32 576 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-219ENST00000584887 DNAJC4Q9NNZ3 241 aa14.35□□□□□ -0.11
TOP3A-219ENST00000584887 UQCC1Q9NVA1 299 aa14.35□□□□□ -0.11
TOP3A-219ENST00000584887 TRAV5A0A0B4J249 113 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 UBE2L5PA0A1B0GUS4 154 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 H3BQ15 152 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 H7BYZ3 331 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 MED14OSP0DP75 135 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 ZNF493Q6ZR52 646 aa14.34□□□□□ -0.11
TOP3A-219ENST00000584887 TMEM263Q8WUH6 116 aaKnown RBP14.34□□□□□ -0.11
TOP3A-219ENST00000584887 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
TOP3A-219ENST00000584887 PVALBP20472 110 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms