RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MEOX2P50222 304 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 KLF5Q13887 457 aaPredicted RBP10.66□□□□□ -0.7
UBBP4-202ENST00000584755 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
UBBP4-202ENST00000584755 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 IGHV3OR16-13A0A075B7E8 117 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 IGHV3-49A0A0A0MS15 119 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 IGHV3-74A0A0B4J1X5 117 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 TMEM213A2RRL7 107 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 C9JCJ5 164 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 LINC01619G3V211 115 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 PEX7O00628 323 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
UBBP4-202ENST00000584755 RPL35P42766 123 aaKnown RBP10.65□□□□□ -0.7
UBBP4-202ENST00000584755 PSG9Q00887 426 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 RHEBQ15382 184 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 AWAT1Q58HT5 328 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 C1QL4Q86Z23 238 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 GRAMD2BQ96HH9 432 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.7
UBBP4-202ENST00000584755 CHEK1O14757 476 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 SCO1O75880 301 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
UBBP4-202ENST00000584755 TSSC4Q9Y5U2 329 aaPredicted RBP10.64□□□□□ -0.71
UBBP4-202ENST00000584755 LY96Q9Y6Y9 160 aa10.64□□□□□ -0.71
UBBP4-202ENST00000584755 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 HELTA6NFD8 242 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 ZNF785A8K8V0 405 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 M0R036 132 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 TCRAP04437 139 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 AKR1C3P42330 323 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 TAS2R60P59551 318 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
UBBP4-202ENST00000584755 GNG5P63218 68 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 FHL3Q13643 280 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 OR11H1Q8NG94 326 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 OR1N2Q8NGR9 330 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 IGF2BP2-AS1Q96M15 143 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 C2CD3Q4AC94 2353 aa10.63□□□□□ -0.71
UBBP4-202ENST00000584755 C7orf77A4D0Y5 90 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 B4DEV8 164 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 BMI1P35226 326 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 CNN1P51911 297 aaKnown RBP10.62□□□□□ -0.71
UBBP4-202ENST00000584755 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 KHDC1LQ5JSQ8 128 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 CITED2Q99967 270 aaPredicted RBP10.62□□□□□ -0.71
UBBP4-202ENST00000584755 SLC50A1Q9BRV3 221 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 AAMDCQ9H7C9 122 aa10.62□□□□□ -0.71
UBBP4-202ENST00000584755 A0A087WWC5 75 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 HAX1O00165 279 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
UBBP4-202ENST00000584755 SLURP1P55000 103 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 SRSF2Q01130 221 aaKnown RBP10.61□□□□□ -0.71
UBBP4-202ENST00000584755 TMEM183BQ1AE95 376 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 C8orf86Q6ZUL3 223 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 DPF1Q92782 380 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 TRAV8-2A0A0B4J237 113 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 TRBV6-1A0A0K0K1D8 114 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 EDN2P20800 178 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 CENPWQ5EE01 88 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 C11orf44Q8N8P7 122 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 RAX2Q96IS3 184 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 PRELID1Q9Y255 219 aa10.61□□□□□ -0.71
UBBP4-202ENST00000584755 SETD2Q9BYW2 2564 aaPredicted RBP10.61□□□□□ -0.71
UBBP4-202ENST00000584755 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 M0R3E3 92 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 DNASE2O00115 360 aaPredicted RBP10.6□□□□□ -0.71
UBBP4-202ENST00000584755 ISLRO14498 428 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 SOCS3O14543 225 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 TSPAN4O14817 238 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 IGLV2-11P01706 119 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 IGLV2-8P01709 118 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 GNG4P50150 75 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 ADIRFQ15847 76 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 HIST2H2BDQ6DRA6 164 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 OCC1Q8TAD7 63 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
UBBP4-202ENST00000584755 FMC1Q96HJ9 113 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 RPS10P5Q9NQ39 176 aa10.6□□□□□ -0.71
UBBP4-202ENST00000584755 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 CBLN1P23435 193 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 KRTAP10-3P60369 221 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 SMUG1Q53HV7 270 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms