RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 MARC2Q969Z3 335 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 RNF2Q99496 336 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 ZFAND3Q9H8U3 227 aa15.12■□□□□ 0.01
SRSF1-206ENST00000583741 MRPL27Q9P0M9 148 aaKnown RBP15.12■□□□□ 0.01
SRSF1-206ENST00000583741 KLK5Q9Y337 293 aaPredicted RBP15.12■□□□□ 0.01
SRSF1-206ENST00000583741 CTXND1A0A1B0GTU2 59 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 H2AFB1P0C5Y9 115 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 USF2Q15853 346 aaPredicted RBP15.11■□□□□ 0.01
SRSF1-206ENST00000583741 SSX7Q7RTT5 188 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 UHRF2Q96PU4 802 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 MRPL32Q9BYC8 188 aaKnown RBP15.11■□□□□ 0.01
SRSF1-206ENST00000583741 SEPSECSQ9HD40 501 aaKnown RBP15.11■□□□□ 0.01
SRSF1-206ENST00000583741 FUT9Q9Y231 359 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 HIGD1AQ9Y241 93 aa15.11■□□□□ 0.01
SRSF1-206ENST00000583741 NDUFA4O00483 81 aa15.1■□□□□ 0.01
SRSF1-206ENST00000583741 ATF4P18848 351 aaPredicted RBP15.1■□□□□ 0.01
SRSF1-206ENST00000583741 ODF3L2Q3SX64 289 aa15.1■□□□□ 0.01
SRSF1-206ENST00000583741 RAB24Q969Q5 203 aa15.1■□□□□ 0.01
SRSF1-206ENST00000583741 RNF183Q96D59 192 aa15.1■□□□□ 0.01
SRSF1-206ENST00000583741 SPAG8Q99932 426 aaPredicted RBP15.1■□□□□ 0.01
SRSF1-206ENST00000583741 IGHV3OR16-8A0A075B7F1 116 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 MAP1LC3B2A6NCE7 125 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 LINC00305Q7Z4B0 112 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 SFT2D1Q8WV19 159 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 MAP1LC3BQ9GZQ8 125 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 UFC1Q9Y3C8 167 aa15.09■□□□□ 0.01
SRSF1-206ENST00000583741 UBE2CO00762 179 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 HMGB3O15347 200 aaKnown RBP15.08■□□□□ 0.01
SRSF1-206ENST00000583741 EIF3GO75821 320 aaKnown RBP eCLIP15.08■□□□□ 0.01
SRSF1-206ENST00000583741 SPATA31B1PQ5VZV4 182 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 LCN15Q6UWW0 184 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 MIR17HGQ75NE6 70 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 S100A7AQ86SG5 101 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 RABAC1Q9UI14 185 aa15.08■□□□□ 0.01
SRSF1-206ENST00000583741 TEX46H3BTG2 121 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 TSPAN4O14817 238 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 PHLDA1Q8WV24 401 aaPredicted RBP15.08■□□□□ 0
SRSF1-206ENST00000583741 MBD3L1Q8WWY6 194 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 TMEM190Q8WZ59 177 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 C20orf24Q9BUV8 137 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 SLC25A39Q9BZJ4 359 aaPredicted RBP15.08■□□□□ 0
SRSF1-206ENST00000583741 HRH4Q9H3N8 390 aa15.08■□□□□ 0
SRSF1-206ENST00000583741 KIR2DL5BA0A0G2JN68 375 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 KIR2DL5BA0A0G2JPC4 375 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 RPL35AP18077 110 aaKnown RBP15.07■□□□□ 0
SRSF1-206ENST00000583741 MORN5Q5VZ52 161 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 LGALS9CQ6DKI2 356 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 KIR2DL5AQ8N109 375 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 KIR2DL5BQ8NHK3 375 aa15.07■□□□□ 0
SRSF1-206ENST00000583741 A0A1B0GV50 99 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 HBE1P02100 147 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 STAG3L2P0CL84 134 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 STAG3L3P0CL85 134 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 S100A7P31151 101 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 FGF8P55075 233 aaPredicted RBP15.06■□□□□ 0
SRSF1-206ENST00000583741 TAS2R45P59539 299 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 KHDC3LQ587J8 217 aa15.06■□□□□ 0
SRSF1-206ENST00000583741 RYR1P21817 5038 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 TRAV1-1A0A0B4J248 108 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 H3BRN7 92 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 LYPD6BQ8NI32 183 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 METTL26Q96S19 204 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 SHANK2-AS3Q9BTD1 123 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 SCRT1Q9BWW7 348 aa15.05■□□□□ -0
SRSF1-206ENST00000583741 TRAV5A0A0B4J249 113 aa15.04■□□□□ -0
SRSF1-206ENST00000583741 ARL14EPLP0DKL9 152 aa15.04■□□□□ -0
SRSF1-206ENST00000583741 SLC25A2Q9BXI2 301 aa15.04■□□□□ -0
SRSF1-206ENST00000583741 MAP6D1Q9H9H5 199 aa15.04■□□□□ -0
SRSF1-206ENST00000583741 DAZ1Q9NQZ3 744 aaKnown RBP15.04■□□□□ -0
SRSF1-206ENST00000583741 PFDN2Q9UHV9 154 aa15.04■□□□□ -0
SRSF1-206ENST00000583741 DNAH6Q9C0G6 4158 aa15.03■□□□□ -0
SRSF1-206ENST00000583741 ZNF207O43670 478 aaKnown RBP15.03■□□□□ -0
SRSF1-206ENST00000583741 OR7C2O60412 319 aa15.03■□□□□ -0
SRSF1-206ENST00000583741 CXorf1O96002 111 aa15.03■□□□□ -0
SRSF1-206ENST00000583741 NPPCP23582 126 aa15.03■□□□□ -0
SRSF1-206ENST00000583741 LEMD1Q68G75 181 aa15.03■□□□□ -0
SRSF1-206ENST00000583741 ZNF98A6NK75 572 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 CRYBB3P26998 211 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 PQLC2Q6ZP29 291 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 IQCF2Q8IXL9 164 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 FAM167A-AS1Q96KT0 104 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 RNF24Q9Y225 148 aa15.02■□□□□ -0
SRSF1-206ENST00000583741 ZNF124Q15973 351 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 APRG1Q8IVJ8 170 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 STXBP6Q8NFX7 210 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 NARS2Q96I59 477 aaKnown RBP15.01□□□□□ -0.01
SRSF1-206ENST00000583741 OR4C46A6NHA9 309 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 K7EMT4 169 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 CCL20P78556 96 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 TMPRSS5Q9H3S3 457 aa15.01□□□□□ -0.01
SRSF1-206ENST00000583741 GCHFRP30047 84 aa15□□□□□ -0.01
SRSF1-206ENST00000583741 NANOS2P60321 138 aaKnown RBP15□□□□□ -0.01
SRSF1-206ENST00000583741 ZNF503Q96F45 646 aa15□□□□□ -0.01
SRSF1-206ENST00000583741 PAXXQ9BUH6 204 aa15□□□□□ -0.01
SRSF1-206ENST00000583741 OR51M1Q9H341 326 aa15□□□□□ -0.01
SRSF1-206ENST00000583741 U3KQE9 123 aa15□□□□□ -0.01
SRSF1-206ENST00000583741 IGHV3-49A0A0A0MS15 119 aa14.99□□□□□ -0.01
SRSF1-206ENST00000583741 LINC00862A6NCI5 91 aa14.99□□□□□ -0.01
SRSF1-206ENST00000583741 BUB3O43684 328 aa14.99□□□□□ -0.01
SRSF1-206ENST00000583741 APOHP02749 345 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms