RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 CBLN1P23435 193 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 CA7P43166 264 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ZNF136P52737 540 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 RHOAP61586 193 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 Q56UQ5 140 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 C1orf140Q5VVS0 124 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ZFAND6Q6FIF0 208 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 GLIPR1L1Q6UWM5 242 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 Q6ZS92 163 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SHISA6Q6ZSJ9 500 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SPATA12Q7Z6I5 190 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 HMGN2P46Q86SG4 172 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SLC22A24Q8N4F4 322 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 TMEM251Q8N6I4 163 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 DCAF4L2Q8NA75 395 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.44□□□□□ -1.86
SS18-223ENST00000583595 ZNF439Q8NDP4 499 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 OR4X2Q8NGF9 303 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 OR8B12Q8NGG6 310 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 OR1L1Q8NH94 360 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ZNF721Q8TF20 911 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 CT55Q8WUE5 264 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SLC25A44Q96H78 314 aaPredicted RBP3.44□□□□□ -1.86
SS18-223ENST00000583595 NMNAT3Q96T66 252 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ULBP3Q9BZM4 244 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ZNF286AQ9HBT8 521 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 HES4Q9HCC6 221 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 LINC00312Q9Y6C7 94 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 LY96Q9Y6Y9 160 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 ARL2-SNX15V9GYD0 113 aa3.44□□□□□ -1.86
SS18-223ENST00000583595 SCN1AP35498 2009 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 HEATR5AQ86XA9 2040 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 MYBPHLA2RUH7 354 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 C2orf70A6NJV1 201 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 FABP5P3A8MUU1 101 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 F5H5K5 113 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 SOCS1O15524 211 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 CRXO43186 299 aaPredicted RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 TRBV12-3P01733 135 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 APOA2P02652 100 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 ORM1P02763 201 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 HMGN2P05204 90 aaKnown RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 NTF3P20783 257 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 PEBP1P30086 187 aaKnown RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 NMUP48645 174 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 OR8B8Q15620 311 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 ABCA11PQ4W5N1 156 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 TTC32Q5I0X7 151 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 TMEM78Q5T7P6 136 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 TMEM215Q68D42 235 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 EBLN2Q6P2I7 272 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 CEMP1Q6PRD7 247 aaPredicted RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 LYPD2Q6UXB3 125 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 LYZL2Q7Z4W2 148 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 ZCCHC24Q8N2G6 241 aaKnown RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 TEX29Q8N6K0 151 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 MAPK1IP1LQ8NDC0 245 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 TMEM158Q8WZ71 300 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 RDH5Q92781 318 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 DNAJC30Q96LL9 226 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 GPX7Q96SL4 187 aaPredicted RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 HDHD3Q9BSH5 251 aaPredicted RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 KCNIP2Q9NS61 270 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 SPANXCQ9NY87 97 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 RABAC1Q9UI14 185 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 PLXNA4Q9HCM2 1894 aa3.43□□□□□ -1.86
SS18-223ENST00000583595 KIF26AQ9ULI4 1882 aaPredicted RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 MKI67P46013 3256 aaKnown RBP3.43□□□□□ -1.86
SS18-223ENST00000583595 TRGV10A0A0A0MS01 117 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 ZNF850A8MQ14 1090 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 ZNF878C9JN71 531 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 TMEM262E9PQX1 116 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 C15orf65H3BRN8 121 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 SYS1-DBNDD2H3BUS1 97 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 SDCBPO00560 298 aaPredicted RBP3.42□□□□□ -1.86
SS18-223ENST00000583595 HMGB3O15347 200 aaKnown RBP3.42□□□□□ -1.86
SS18-223ENST00000583595 ANGPTL7O43827 346 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 ISG15P05161 165 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 CYBAP13498 195 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 EVI2AP22794 236 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 BLVRBP30043 206 aaPredicted RBP3.42□□□□□ -1.86
SS18-223ENST00000583595 IGLV3-21P80748 117 aaPredicted RBP3.42□□□□□ -1.86
SS18-223ENST00000583595 PSG4Q00888 419 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 CATR1Q13166 79 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 EIF3IQ13347 325 aaKnown RBP3.42□□□□□ -1.86
SS18-223ENST00000583595 ZNF141Q15928 474 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 ORMDL2Q53FV1 153 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 Q6Q795 121 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 RASL11AQ6T310 242 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 TMEM136Q6ZRR5 245 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 Q6ZUT4 128 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 OOSP2Q86WS3 158 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 OTOSQ8NHW6 89 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 NT5CQ8TCD5 201 aa3.42□□□□□ -1.86
SS18-223ENST00000583595 PIFOQ8TCI5 191 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms