RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 IGHV3-30-3P0DP02 117 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 IGHV3-30-5P0DP03 117 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 RPL7P18124 248 aaKnown RBP4.09□□□□□ -1.75
NUP85-221ENST00000583548 CXCL3P19876 107 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 LEPP41159 167 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 ZNF90Q03938 601 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 TRIM16LQ309B1 348 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 ANXA2RQ3ZCQ2 193 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 GPR107Q5VW38 600 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 IGFL4Q6B9Z1 124 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 FAM122CQ6P4D5 195 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 C11orf72Q8NBR9 251 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
NUP85-221ENST00000583548 PYDC1Q8WXC3 89 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 RPUSD4Q96CM3 377 aaKnown RBP4.09□□□□□ -1.75
NUP85-221ENST00000583548 SLC35E1Q96K37 410 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 FXYD6Q9H0Q3 95 aa4.09□□□□□ -1.75
NUP85-221ENST00000583548 TRAV18A0A075B6X5 111 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 TRAV12-3A0A0B4J271 114 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 CRYM-AS1A6NIL9 109 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 CEBPZOSA8MTT3 80 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 GGTLC3B5MD39 225 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 SEC11BP0C7V7 166 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 GATA2P23769 480 aaPredicted RBP4.08□□□□□ -1.76
NUP85-221ENST00000583548 HRH1P35367 487 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 RFX2P48378 723 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 FABP5Q01469 135 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 AARDQ4LEZ3 155 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 S100A7AQ86SG5 101 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 C10orf67Q8IYJ2 551 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 EIF4E3Q8N5X7 224 aaKnown RBP4.08□□□□□ -1.76
NUP85-221ENST00000583548 NHLRC2Q8NBF2 726 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 BPIFCQ8NFQ6 507 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 OR5H2Q8NGV7 314 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 IL22RA2Q969J5 263 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 ODF3Q96PU9 254 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 TRGV9Q99603 122 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 TMEM147Q9BVK8 224 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.08□□□□□ -1.76
NUP85-221ENST00000583548 RHBDL2Q9NX52 303 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 RNF24Q9Y225 148 aa4.08□□□□□ -1.76
NUP85-221ENST00000583548 LSM2Q9Y333 95 aaKnown RBP4.08□□□□□ -1.76
NUP85-221ENST00000583548 FABP12A6NFH5 140 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 NOTOA8MTQ0 251 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 SLC25A5P05141 298 aaKnown RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 PFN1P07737 140 aaKnown RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 GPX4P36969 197 aaPredicted RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 UCP3P55916 312 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 ATP5IP56385 69 aaPredicted RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 TSPAN5P62079 268 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 MLLT11Q13015 90 aaPredicted RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 NMSQ5H8A3 153 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 C8orf59Q8N0T1 100 aaPredicted RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 C7orf33Q8WU49 177 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 CYGBQ8WWM9 190 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 FKBP14Q9NWM8 211 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 MRPL16Q9NX20 251 aaKnown RBP4.07□□□□□ -1.76
NUP85-221ENST00000583548 SSR3Q9UNL2 185 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 KLF12Q9Y4X4 402 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 U3KQ87 197 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 DNAH8Q96JB1 4490 aa4.07□□□□□ -1.76
NUP85-221ENST00000583548 IGKV1D-37A0A075B6S9 117 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 A0A087X0K7 114 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 TAAR5O14804 337 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 B3GALNT1O75752 331 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 PMP2P02689 132 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 CXCL2P19875 107 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 RND3P61587 244 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 DHRSXQ8N5I4 330 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 OR10G4Q8NGN3 311 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 ZNF431Q8TF32 576 aaPredicted RBP4.06□□□□□ -1.76
NUP85-221ENST00000583548 RNF185Q96GF1 192 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 ZC2HC1AQ96GY0 325 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 ZNF486Q96H40 463 aaPredicted RBP4.06□□□□□ -1.76
NUP85-221ENST00000583548 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 AUNIPQ9H7T9 357 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 VAX2Q9UIW0 290 aa4.06□□□□□ -1.76
NUP85-221ENST00000583548 IGKV2D-24A0A075B6R9 120 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 C7orf71A4D174 169 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 J3KRW8 73 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 MPDU1O75352 247 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 PITX3O75364 302 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 NAT1P18440 290 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 ORM2P19652 201 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 RAP2BP61225 183 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 DGAT2L7PQ6IED9 249 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 LCN15Q6UWW0 184 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 ARRDC1Q8N5I2 433 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 OR1S1Q8NH92 325 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 TMEM170AQ8WVE7 144 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 ZNF479Q96JC4 524 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 C2orf50Q96LR7 162 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 ARPC5LQ9BPX5 153 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 C8orf4Q9NR00 106 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 SCN3BQ9NY72 215 aa4.05□□□□□ -1.76
NUP85-221ENST00000583548 C3orf85A0A1B0GTC6 90 aa4.04□□□□□ -1.76
NUP85-221ENST00000583548 MEIS3P1A6NDR6 274 aa4.04□□□□□ -1.76
NUP85-221ENST00000583548 PTGES3LE9PB15 166 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms