RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 LYPD1Q8N2G4 141 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
SENP3-208ENST00000583277 TMEM218A2RU14 115 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 ZNF785A8K8V0 405 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 KRBOX1C9JBD0 128 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 TMEM250H0YL14 139 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
SENP3-208ENST00000583277 SFTA3P0C7M3 94 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 MYCNOSP40205 109 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 ATP5G3P48201 142 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
SENP3-208ENST00000583277 C9JQL5 133 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 S100A1P23297 94 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
SENP3-208ENST00000583277 PSG9Q00887 426 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
SENP3-208ENST00000583277 CITED1Q99966 193 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 SMAD5-AS1Q9Y6J3 95 aa11.13□□□□□ -0.63
SENP3-208ENST00000583277 H3BTX0 84 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 NDUFB4O95168 129 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
SENP3-208ENST00000583277 CBLN1P23435 193 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 CYB561D1Q8N8Q1 229 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 SLC50A1Q9BRV3 221 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 Q9H3A6 140 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 AAMDCQ9H7C9 122 aa11.12□□□□□ -0.63
SENP3-208ENST00000583277 FOLR2P14207 255 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 SUMO1P63165 101 aaKnown RBP11.11□□□□□ -0.63
SENP3-208ENST00000583277 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 C5orf17Q8NAS9 161 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 C11orf52Q96A22 123 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 SLC17A3O00476 420 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 OVOL1O14753 267 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 TCF24Q7RTU0 167 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 RPUSD4Q96CM3 377 aaKnown RBP11.11□□□□□ -0.63
SENP3-208ENST00000583277 C17orf77Q96MU5 243 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 SEC11CQ9BY50 192 aa11.11□□□□□ -0.63
SENP3-208ENST00000583277 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 PGPA6NDG6 321 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 F8W036 122 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
SENP3-208ENST00000583277 EDN2P20800 178 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 CEBPGP53567 150 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 CMTM2Q8TAZ6 248 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 HIST1H2BAQ96A08 127 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 ZNF331Q9NQX6 463 aaPredicted RBP11.1□□□□□ -0.63
SENP3-208ENST00000583277 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
SENP3-208ENST00000583277 PF4P02776 101 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
SENP3-208ENST00000583277 ARL6IP6Q8N6S5 226 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 DYNLRB2Q8TF09 96 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 TMEM158Q8WZ71 300 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 LINC00052Q96N35 136 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
SENP3-208ENST00000583277 PEX7O00628 323 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 CSN3P07498 182 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 FAM74A3Q4VXF1 159 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 EXOC3-AS1Q8N2X6 119 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 MLXQ9UH92 298 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 PRELID1Q9Y255 219 aa11.08□□□□□ -0.64
SENP3-208ENST00000583277 ADCYAP1P18509 176 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 CSN1S1P47710 185 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 ADAMTSL5Q6ZMM2 481 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 MRPL53Q96EL3 112 aaKnown RBP11.07□□□□□ -0.64
SENP3-208ENST00000583277 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 PARLQ9H300 379 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 EPDR1Q9UM22 224 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 CARHSP1Q9Y2V2 147 aaKnown RBP11.07□□□□□ -0.64
SENP3-208ENST00000583277 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
SENP3-208ENST00000583277 SERTM2A0A1B0GWG4 89 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 AKR1C3P42330 323 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 C2CD4CQ8TF44 421 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 ZNF747Q9BV97 191 aa11.07□□□□□ -0.64
SENP3-208ENST00000583277 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 K7EQM0 130 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 ISLRO14498 428 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 SOCS3O14543 225 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 TCRAP04437 139 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 CNN1P51911 297 aaKnown RBP11.06□□□□□ -0.64
SENP3-208ENST00000583277 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 NIPSNAP3BQ9BS92 247 aa11.06□□□□□ -0.64
SENP3-208ENST00000583277 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
SENP3-208ENST00000583277 ID1P41134 155 aa11.05□□□□□ -0.64
SENP3-208ENST00000583277 GNG5P63218 68 aa11.05□□□□□ -0.64
SENP3-208ENST00000583277 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
SENP3-208ENST00000583277 MS4A6AQ9H2W1 248 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms