RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	GNB1L	Q9BYB4	327 aa		5.78	□□□□□ -1.48
NF1-222	ENST00000582892	SIRPD	Q9H106	197 aa		5.78	□□□□□ -1.48
NF1-222	ENST00000582892	DNAJC4	Q9NNZ3	241 aa		5.78	□□□□□ -1.48
NF1-222	ENST00000582892	ZNRD1	Q9P1U0	126 aa		5.78	□□□□□ -1.48
NF1-222	ENST00000582892	TCRBV4S1A1T	A0A5B7	111 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892		K7EN84	100 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	IGHV1-8	P0DP01	117 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	GZMB	P10144	247 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	GNG4	P50150	75 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	PRRX1	P54821	245 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	ZNF90	Q03938	601 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892		Q0VG73	95 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	LY6E	Q16553	131 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	FAM231D	Q6ZW35	169 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	MMD2	Q8IY49	270 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	WFDC9	Q8NEX5	89 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	C8orf46	Q8TAG6	207 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	TMEM37	Q8WXS4	190 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	ZNF503	Q96F45	646 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	FAM167A-AS1	Q96KT0	104 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	IGF2BP2-AS1	Q96M15	143 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	TRGV9	Q99603	122 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	CHRDL1	Q9BU40	450 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	TMEM133	Q9H2Q1	129 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	CTSZ	Q9UBR2	303 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.77	□□□□□ -1.49
NF1-222	ENST00000582892		V9GYV3	84 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	KMT2A	Q03164	3969 aa		5.77	□□□□□ -1.49
NF1-222	ENST00000582892	RBMY1B	A6NDE4	496 aa	Known RBP	5.76	□□□□□ -1.49
NF1-222	ENST00000582892	RBMY1E	A6NEQ0	496 aa	Known RBP	5.76	□□□□□ -1.49
NF1-222	ENST00000582892	CGB1	A6NKQ9	187 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	COX7A2P2	O60397	106 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	OR7C2	O60412	319 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	IGLV1-47	P01700	117 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	CRYGB	P07316	175 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	RBMY1D	P0C7P1	496 aa	Known RBP	5.76	□□□□□ -1.49
NF1-222	ENST00000582892	MYOD1	P15172	320 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	CCL3L1	P16619	93 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	PLP1	P60201	277 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	ARF6	P62330	175 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	CX3CL1	P78423	397 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	WT1-AS	Q06250	92 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	KLRD1	Q13241	179 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	IQCJ	Q1A5X6	159 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	PDZD11	Q5EBL8	140 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	CENPW	Q5EE01	88 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	FAM209B	Q5JX69	171 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	C10orf113	Q5VZT2	155 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	C11orf42	Q8N5U0	333 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	TMEM116	Q8NCL8	245 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	NUDT10	Q8NFP7	164 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	OR8B3	Q8NGG8	313 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	H1FX	Q92522	213 aa	Known RBP	5.76	□□□□□ -1.49
NF1-222	ENST00000582892	NUDT11	Q96G61	164 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	OR8B2	Q96RD0	313 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	SLC25A2	Q9BXI2	301 aa		5.76	□□□□□ -1.49
NF1-222	ENST00000582892	IGKV1D-37	A0A075B6S9	117 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	SMIM27	A0A1W2PRY6	76 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	IGLC7	A0M8Q6	106 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	GGTLC3	B5MD39	225 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	ENSA	O43768	121 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	HLA-DQA1	P01909	254 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	CRYBB3	P26998	211 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	DDT	P30046	118 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	ERVFC1-1	P60608	527 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	RAB4B	P61018	213 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	RAN	P62826	216 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	UBE2L3	P68036	154 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	EGFEM1P	Q0D2K5	195 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	PRSS8	Q16651	343 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	MRGPRG-AS1	Q2M3A8	158 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	OR10J3	Q5JRS4	329 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	VMO1	Q7Z5L0	202 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	MRPL52	Q86TS9	123 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	NDUFA11	Q86Y39	141 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	OR5T1	Q8NG75	326 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	OR4F17	Q8NGA8	305 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	OR10W1	Q8NGF6	305 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	WIPF2	Q8TF74	440 aa	Predicted RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	RBM14	Q96PK6	669 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	KRTAP4-11	Q9BYQ6	195 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	ZMAT5	Q9UDW3	170 aa	Known RBP	5.75	□□□□□ -1.49
NF1-222	ENST00000582892	KLF12	Q9Y4X4	402 aa		5.75	□□□□□ -1.49
NF1-222	ENST00000582892	IGHV2-26	A0A0B4J1V2	119 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892		A0A1W2PPI3	338 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	PGPEP1L	A6NFU8	196 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892		H3BUX3	64 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	ACTL6B	O94805	426 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	IGLV2-8	P01709	118 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	AMY1A	P04745	511 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	REG1A	P05451	166 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	CRISP2	P16562	243 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	MYCNOS	P40205	109 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	RPL27A	P46776	148 aa	Known RBP	5.74	□□□□□ -1.49
NF1-222	ENST00000582892	TPPP2	P59282	170 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	TMEM95	Q3KNT9	176 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	MOB3B	Q86TA1	216 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	OR5AU1	Q8NGC0	362 aa		5.74	□□□□□ -1.49
NF1-222	ENST00000582892	OR1L6	Q8NGR2	347 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms