RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 RNF125Q96EQ8 232 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 DERL1Q9BUN8 251 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
PTPRM-213ENST00000580949 ESM1Q9NQ30 184 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM167BQ9NRX6 74 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM14CQ9P0S9 112 aa4.79□□□□□ -1.64
PTPRM-213ENST00000580949 MTORP42345 2549 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF469Q96JG9 3925 aaPredicted RBP4.78□□□□□ -1.64
PTPRM-213ENST00000580949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TRBV7-1A0A0A6YYK4 115 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 A0A1W2PRE2 83 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 DNAJC9-AS1A6NH13 148 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF98A6NK75 572 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 H3BRN7 92 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 H3BUA1 57 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TGOLN2O43493 480 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 PDE6DO43924 150 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 SNAPINO95295 136 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 IGHV3-11P01762 117 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 NBEAP1P0C6P0 100 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 PSMB8P28062 276 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TPPP2P59282 170 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF674Q2M3X9 581 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM88Q6PEY1 159 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF600Q6ZNG1 722 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 CBLN2Q8IUK8 224 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM86BQ8N661 226 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TEX29Q8N6K0 151 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 C11orf52Q96A22 123 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 SMIM7Q9BQ49 75 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 PRSS22Q9GZN4 317 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 NPFFR1Q9GZQ6 430 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 PARLQ9H300 379 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 SDF2L1Q9HCN8 221 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 SERTAD4Q9NUC0 356 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF586Q9NXT0 402 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
PTPRM-213ENST00000580949 FLNBO75369 2602 aaKnown RBP4.78□□□□□ -1.64
PTPRM-213ENST00000580949 TRBV20OR9-2A0A075B6H5 130 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 ZNF727A8MUV8 499 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 F6UZH7 168 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 M0R036 132 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
PTPRM-213ENST00000580949 IGLC2P0DOY2 106 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 HIST1H1EP10412 219 aaKnown RBP4.77□□□□□ -1.65
PTPRM-213ENST00000580949 CRYBB3P26998 211 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 RPL15P61313 204 aaKnown RBP4.77□□□□□ -1.65
PTPRM-213ENST00000580949 RANP62826 216 aaKnown RBP4.77□□□□□ -1.65
PTPRM-213ENST00000580949 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 OR4X2Q8NGF9 303 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 MYOZ3Q8TDC0 251 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 C2CD4CQ8TF44 421 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 BLNKQ8WV28 456 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 TVP23CQ96ET8 276 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 OR5B12Q96R08 314 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 ATP6V0BQ99437 205 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 TXNDC17Q9BRA2 123 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 GNB4Q9HAV0 340 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 GAR1Q9NY12 217 aaKnown RBP4.77□□□□□ -1.65
PTPRM-213ENST00000580949 SMAD5-AS1Q9Y6J3 95 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 ARL2-SNX15V9GYD0 113 aa4.77□□□□□ -1.65
PTPRM-213ENST00000580949 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 TMEM89A2RUT3 159 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 BMPR1BO00238 502 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 SLC17A3O00476 420 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 ZNF207O43670 478 aaKnown RBP4.76□□□□□ -1.65
PTPRM-213ENST00000580949 NUDT3O95989 172 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 ARL3P36405 182 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 RPL23P62829 140 aaKnown RBP4.76□□□□□ -1.65
PTPRM-213ENST00000580949 TCTEX1D4Q5JR98 221 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 UNQ9165/PRO28630Q6UXU0 137 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 Q6ZSV7 163 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 LINC00479Q96M42 142 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 NIPSNAP3BQ9BS92 247 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 RPS10P5Q9NQ39 176 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 NAT8Q9UHE5 227 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 RABAC1Q9UI14 185 aa4.76□□□□□ -1.65
PTPRM-213ENST00000580949 TRBV19A0A075B6N1 114 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 IGHV3OR16-13A0A075B7E8 117 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 IGHV3-49A0A0A0MS15 119 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 IGHV3-74A0A0B4J1X5 117 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 A0A0G2JLM5 398 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 PGPA6NDG6 321 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 HELTA6NFD8 242 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 COLCA2A8K830 154 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 CLDN34H7C241 214 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 TSPAN4O14817 238 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 BUB3O43684 328 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 PRB4P10163 310 aaPredicted RBP4.75□□□□□ -1.65
PTPRM-213ENST00000580949 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
PTPRM-213ENST00000580949 GNG5P63218 68 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms