RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CD5P06127 495 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 ATF4P18848 351 aaPredicted RBP14.23□□□□□ -0.13
LIMD2-209ENST00000580222 RPL11P62913 178 aaKnown RBP14.23□□□□□ -0.13
LIMD2-209ENST00000580222 GCSAMLQ5JQS6 135 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 C9orf62Q8N4C0 152 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 TMEM37Q8WXS4 190 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 SH3BGRL3Q9H299 93 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 RNF24Q9Y225 148 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 HELTA6NFD8 242 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 NKX2-5P52952 324 aaPredicted RBP14.22□□□□□ -0.13
LIMD2-209ENST00000580222 EIF5AP63241 154 aaKnown RBP14.22□□□□□ -0.13
LIMD2-209ENST00000580222 C1orf194Q5T5A4 169 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 LEMD1Q68G75 181 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 SIGLEC15Q6ZMC9 328 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 OR8I2Q8N0Y5 310 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 TP53TG1Q9Y2A0 90 aa14.22□□□□□ -0.13
LIMD2-209ENST00000580222 TSPAN4O14817 238 aa14.21□□□□□ -0.13
LIMD2-209ENST00000580222 C4BPBP20851 252 aa14.21□□□□□ -0.13
LIMD2-209ENST00000580222 ACOT6Q3I5F7 207 aaPredicted RBP14.21□□□□□ -0.13
LIMD2-209ENST00000580222 FAM90A2PQ658T7 463 aa14.21□□□□□ -0.13
LIMD2-209ENST00000580222 OR2G3Q8NGZ4 309 aa14.21□□□□□ -0.13
LIMD2-209ENST00000580222 SLC25A32Q9H2D1 315 aa14.21□□□□□ -0.13
LIMD2-209ENST00000580222 TFPI2P48307 235 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 PAFAH1B2P68402 229 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 FAM78BQ5VT40 261 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 Q6ZWC4 215 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 STXBP6Q8NFX7 210 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 GPR82Q96P67 336 aa14.2□□□□□ -0.14
LIMD2-209ENST00000580222 SPAG8Q99932 426 aaPredicted RBP14.2□□□□□ -0.14
LIMD2-209ENST00000580222 OR4C46A6NHA9 309 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 DNASE2O00115 360 aaPredicted RBP14.19□□□□□ -0.14
LIMD2-209ENST00000580222 TPT1P13693 172 aaKnown RBP14.19□□□□□ -0.14
LIMD2-209ENST00000580222 M6PRP20645 277 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 GALR1P47211 349 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 RAB2AP61019 212 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 SERF2P84101 59 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 MORN5Q5VZ52 161 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 GBGT1Q8N5D6 347 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 RNF183Q96D59 192 aa14.19□□□□□ -0.14
LIMD2-209ENST00000580222 MRPL32Q9BYC8 188 aaKnown RBP14.19□□□□□ -0.14
LIMD2-209ENST00000580222 RPL7P18124 248 aaKnown RBP14.18□□□□□ -0.14
LIMD2-209ENST00000580222 NANOS2P60321 138 aaKnown RBP14.18□□□□□ -0.14
LIMD2-209ENST00000580222 SPATA31B1PQ5VZV4 182 aa14.18□□□□□ -0.14
LIMD2-209ENST00000580222 MS4A6AQ9H2W1 248 aa14.18□□□□□ -0.14
LIMD2-209ENST00000580222 FUT9Q9Y231 359 aa14.18□□□□□ -0.14
LIMD2-209ENST00000580222 MBP02144 154 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 SPP1P10451 314 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 RHOBP62745 196 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 FAM122CQ6P4D5 195 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 MIR17HGQ75NE6 70 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 BPIFA4PQ86YQ2 179 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 BAP18Q8IXM2 172 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 OR10G4Q8NGN3 311 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 OR10G9Q8NGN4 311 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 OR10G7Q8NGN6 311 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 STOML3Q8TAV4 291 aa14.17□□□□□ -0.14
LIMD2-209ENST00000580222 SEPSECSQ9HD40 501 aaKnown RBP14.17□□□□□ -0.14
LIMD2-209ENST00000580222 TRAV5A0A0B4J249 113 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 A0A1W2PPV4 95 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 BOLA2-SMG1P6H3BVE0 249 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 TMEM41BQ5BJD5 291 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 AKR1C8PQ5T2L2 129 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 SLC51BQ86UW2 128 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 NRN1Q9NPD7 142 aa14.16□□□□□ -0.14
LIMD2-209ENST00000580222 LINC00336Q6ZUF6 198 aa14.15□□□□□ -0.14
LIMD2-209ENST00000580222 TRAV2A0A0B4J234 112 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 SEC11BP0C7V7 166 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 CDC34P49427 236 aaPredicted RBP14.14□□□□□ -0.15
LIMD2-209ENST00000580222 TAS2R45P59539 299 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 SLC25A2Q9BXI2 301 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 UBQLN2Q9UHD9 624 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 APLNQ9ULZ1 77 aa14.14□□□□□ -0.15
LIMD2-209ENST00000580222 MEOX2P50222 304 aa14.13□□□□□ -0.15
LIMD2-209ENST00000580222 APOC4P55056 127 aa14.13□□□□□ -0.15
LIMD2-209ENST00000580222 KHDC3LQ587J8 217 aa14.13□□□□□ -0.15
LIMD2-209ENST00000580222 K7EQG2 157 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 MRPS12O15235 138 aaKnown RBP14.12□□□□□ -0.15
LIMD2-209ENST00000580222 OR7C2O60412 319 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 EIF3GO75821 320 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIMD2-209ENST00000580222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 DCANP1Q8TF63 244 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 TMED6Q8WW62 240 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 ACTR3CQ9C0K3 210 aaPredicted RBP14.12□□□□□ -0.15
LIMD2-209ENST00000580222 RPRMQ9NS64 109 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 BOLA1Q9Y3E2 137 aa14.12□□□□□ -0.15
LIMD2-209ENST00000580222 A0A087X0K7 114 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 UBE2CO00762 179 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 SNRPCP09234 159 aaKnown RBP14.11□□□□□ -0.15
LIMD2-209ENST00000580222 PYYP10082 97 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 RPL35AP18077 110 aaKnown RBP14.11□□□□□ -0.15
LIMD2-209ENST00000580222 SAMD13Q5VXD3 122 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 EIF5AL1Q6IS14 154 aaKnown RBP14.11□□□□□ -0.15
LIMD2-209ENST00000580222 LRRC20Q8TCA0 184 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 FAM167A-AS1Q96KT0 104 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 C16orf92Q96LL3 132 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 PAXXQ9BUH6 204 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 OR51M1Q9H341 326 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 TMEM14CQ9P0S9 112 aa14.11□□□□□ -0.15
LIMD2-209ENST00000580222 RTL8CO15255 209 aa14.1□□□□□ -0.15
LIMD2-209ENST00000580222 HMGB3O15347 200 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms