RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TNFSF18Q9UNG2 199 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 ELOA3CA0A087WX78 387 aaPredicted RBP9.64□□□□□ -0.87
TRAF4-214ENST00000580073 FXYD6-FXYD2A0A087WZ82 144 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 H3BRN7 92 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 SELENOTP62341 195 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 FGL1Q08830 312 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 SIGLEC15Q6ZMC9 328 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 FAM210BQ96KR6 192 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 SCRT1Q9BWW7 348 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 NPCDR1Q9BY65 106 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 WDR61Q9GZS3 305 aaKnown RBP9.64□□□□□ -0.87
TRAF4-214ENST00000580073 ARL6Q9H0F7 186 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 CLEC5AQ9NY25 188 aa9.64□□□□□ -0.87
TRAF4-214ENST00000580073 ZNF98A6NK75 572 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 HYPMO75409 117 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 CFDP00746 253 aaPredicted RBP9.63□□□□□ -0.87
TRAF4-214ENST00000580073 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 RPL29P47914 159 aaKnown RBP9.63□□□□□ -0.87
TRAF4-214ENST00000580073 CD300CQ08708 224 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 GCSAMLQ5JQS6 135 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 SAMD13Q5VXD3 122 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 ZNF546Q86UE3 836 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 NEU1Q99519 415 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 SLC25A39Q9BZJ4 359 aaPredicted RBP9.63□□□□□ -0.87
TRAF4-214ENST00000580073 SLC25A32Q9H2D1 315 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
TRAF4-214ENST00000580073 OR5G3P0C626 314 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 ID1P41134 155 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 C12orf74Q32Q52 190 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 ARV1Q9H2C2 271 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 SLC39A9Q9NUM3 307 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 XCL2Q9UBD3 114 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 HIGD1AQ9Y241 93 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 PXMP4Q9Y6I8 212 aa9.62□□□□□ -0.87
TRAF4-214ENST00000580073 TRAV5A0A0B4J249 113 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 H3BMM0 161 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
TRAF4-214ENST00000580073 B2MP61769 119 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 SPATA31B1PQ5VZV4 182 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 SLC25A22Q9H936 323 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 MUC4Q99102 2169 aa9.61□□□□□ -0.87
TRAF4-214ENST00000580073 SOCS3O14543 225 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 ARPC5O15511 151 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 MPDU1O75352 247 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 CXCL2P19875 107 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 PSMB3P49720 205 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 PPP1R14BQ96C90 147 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
TRAF4-214ENST00000580073 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 CYTL1Q9NRR1 136 aa9.6□□□□□ -0.87
TRAF4-214ENST00000580073 S100A7P31151 101 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 RAB31Q13636 194 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 PXDC1Q5TGL8 231 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 RPL7L1Q6DKI1 246 aaKnown RBP9.59□□□□□ -0.87
TRAF4-214ENST00000580073 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 ZNF705AQ6ZN79 300 aaPredicted RBP9.59□□□□□ -0.87
TRAF4-214ENST00000580073 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 LINC00305Q7Z4B0 112 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 OR8I2Q8N0Y5 310 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 GOLT1BQ9Y3E0 138 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
TRAF4-214ENST00000580073 A0A1B0GVY2 172 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF705FA8MVS1 300 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 COX7A2P2O60397 106 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 EIF3GO75821 320 aaKnown RBP eCLIP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 SNRPCP09234 159 aaKnown RBP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF705DP0CH99 300 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF705BP0CI00 300 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 DEFB1P60022 68 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 C10orf113Q5VZT2 155 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 ZNF767PQ75MW2 155 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 TCTE3Q8IZS6 198 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 INO80EQ8NBZ0 244 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-214ENST00000580073 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
TRAF4-214ENST00000580073 KIAA1109Q2LD37 5005 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 TRAV8-2A0A0B4J237 113 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 HMSDA8MTL9 139 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 IFNA5P01569 189 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 MEOX2P50222 304 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 RNF212Q495C1 297 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 IGFL4Q6B9Z1 124 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 EBLN2Q6P2I7 272 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 Q6ZRG5 221 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 HSD17B11Q8NBQ5 300 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 FAM167A-AS1Q96KT0 104 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
TRAF4-214ENST00000580073 NIPSNAP3BQ9BS92 247 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms