RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, human

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARA-209	ENST00000579727		A0A0J9YWU9	116 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	IFNA5	P01569	189 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	ZNF705D	P0CH99	300 aa	Predicted RBP	11.93	□□□□□ -0.5
RARA-209	ENST00000579727	ZNF705B	P0CI00	300 aa	Predicted RBP	11.93	□□□□□ -0.5
RARA-209	ENST00000579727	SAMD13	Q5VXD3	122 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	ZFAND6	Q6FIF0	208 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	MORN3	Q6PF18	240 aa	Predicted RBP	11.93	□□□□□ -0.5
RARA-209	ENST00000579727	BPIFA4P	Q86YQ2	179 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	ZNF738	Q8NE65	137 aa		11.93	□□□□□ -0.5
RARA-209	ENST00000579727	STARD9	Q9P2P6	4700 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727		A0A0J9YX75	114 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	C17orf112	F2Z3M2	114 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727		H3BQ15	152 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	SLC17A3	O00476	420 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	FAM78B	Q5VT40	261 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	EBLN2	Q6P2I7	272 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	OR2T35	Q8NGX2	323 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	SCGB1C1	Q8TD33	95 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	GATAD1	Q8WUU5	269 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	RNF24	Q9Y225	148 aa		11.92	□□□□□ -0.5
RARA-209	ENST00000579727	SMLR1	H3BR10	107 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	IGLC2	P0DOY2	106 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	PYY	P10082	97 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	FFAR4	Q5NUL3	377 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	MIR17HG	Q75NE6	70 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	OR11H2	Q8NH07	326 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	RARRES2	Q99969	163 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	SLC35B3	Q9H1N7	401 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	KCNIP2	Q9NS61	270 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727	XCL2	Q9UBD3	114 aa		11.91	□□□□□ -0.5
RARA-209	ENST00000579727		G3V3Q6	166 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	DEFB4A	O15263	64 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	EIF3G	O75821	320 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
RARA-209	ENST00000579727	LCN15	Q6UWW0	184 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	ASB13	Q8WXK3	278 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	AQP10	Q96PS8	301 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	SLC25A2	Q9BXI2	301 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.9	□□□□□ -0.5
RARA-209	ENST00000579727	ZNF586	Q9NXT0	402 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	HYDIN	Q4G0P3	5121 aa		11.9	□□□□□ -0.5
RARA-209	ENST00000579727	NUTF2	P61970	127 aa	Known RBP	11.89	□□□□□ -0.51
RARA-209	ENST00000579727	PSG3	Q16557	428 aa		11.89	□□□□□ -0.51
RARA-209	ENST00000579727	MFF	Q9GZY8	342 aa		11.89	□□□□□ -0.51
RARA-209	ENST00000579727	CSMD3	Q7Z407	3707 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	RNF222	A6NCQ9	220 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.88	□□□□□ -0.51
RARA-209	ENST00000579727	C3orf84	H3BNL1	204 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	CXCL2	P19875	107 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	CNN1	P51911	297 aa	Known RBP	11.88	□□□□□ -0.51
RARA-209	ENST00000579727	HIST1H1A	Q02539	215 aa	Predicted RBP	11.88	□□□□□ -0.51
RARA-209	ENST00000579727	HSD17B11	Q8NBQ5	300 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	CSNK1G2-AS1	Q8NCQ2	148 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	SLC50A1	Q9BRV3	221 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	HRH4	Q9H3N8	390 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	TNFSF18	Q9UNG2	199 aa		11.88	□□□□□ -0.51
RARA-209	ENST00000579727	PSG9	Q00887	426 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	TMEM41B	Q5BJD5	291 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	CASC10	Q5T4H9	136 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.87	□□□□□ -0.51
RARA-209	ENST00000579727	BLNK	Q8WV28	456 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	RPUSD4	Q96CM3	377 aa	Known RBP	11.87	□□□□□ -0.51
RARA-209	ENST00000579727	SAT2	Q96F10	170 aa	Predicted RBP	11.87	□□□□□ -0.51
RARA-209	ENST00000579727	FAM167A-AS1	Q96KT0	104 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.87	□□□□□ -0.51
RARA-209	ENST00000579727	FUT9	Q9Y231	359 aa		11.87	□□□□□ -0.51
RARA-209	ENST00000579727	IGHV3OR16-12	A0A075B7B8	117 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	PRAC2	D3DTV9	90 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	OR10J4	P0C629	311 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	IL17D	Q8TAD2	202 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	C1QTNF4	Q9BXJ3	329 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	MRPL32	Q9BYC8	188 aa	Known RBP	11.86	□□□□□ -0.51
RARA-209	ENST00000579727	TMEM14C	Q9P0S9	112 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727		X6R8D5	127 aa		11.86	□□□□□ -0.51
RARA-209	ENST00000579727	TRBV19	A0A075B6N1	114 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	IGHV4-28	A0A0C4DH34	117 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727		M0R2Z0	102 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	ARPC5	O15511	151 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	DUSP14	O95147	198 aa	Known RBP	11.85	□□□□□ -0.51
RARA-209	ENST00000579727	RAB2A	P61019	212 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	PMS2P11	Q13670	270 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	ZNF266	Q14584	549 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	GUK1	Q16774	197 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	SPINK13	Q1W4C9	94 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	AMTN	Q6UX39	209 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727	OR8A1	Q8NGG7	326 aa		11.85	□□□□□ -0.51
RARA-209	ENST00000579727		A8MTW9	85 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	OR7C2	O60412	319 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	NDUFB4	O95168	129 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	HIST1H1E	P10412	219 aa	Known RBP	11.84	□□□□□ -0.51
RARA-209	ENST00000579727	ATP6V0C	P27449	155 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	RHOB	P62745	196 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	RPL7L1	Q6DKI1	246 aa	Known RBP	11.84	□□□□□ -0.51
RARA-209	ENST00000579727	FAM122C	Q6P4D5	195 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727		Q8NAQ8	132 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	CLUHP3	Q96NS8	147 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	PAXX	Q9BUH6	204 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	SH3BGRL3	Q9H299	93 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	OR51M1	Q9H341	326 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	TIMM9	Q9Y5J7	89 aa		11.84	□□□□□ -0.51
RARA-209	ENST00000579727	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.83	□□□□□ -0.52

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