RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 SLC25A29Q8N8R3 303 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 RMI2Q96E14 147 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 NPCDR1Q9BY65 106 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 KLK13Q9UKR3 277 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 KIF26AQ9ULI4 1882 aaPredicted RBP4.81□□□□□ -1.64
COPS3-216ENST00000579716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.81□□□□□ -1.64
COPS3-216ENST00000579716 RGPD4Q7Z3J3 1758 aa4.81□□□□□ -1.64
COPS3-216ENST00000579716 CRB1P82279 1406 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 SCN1AP35498 2009 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 ALPK3Q96L96 1907 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 MYO3AQ8NEV4 1616 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 IGLV5-37A0A075B6J1 123 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 TMEM272A0A1B0GTI8 110 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 PEX7O00628 323 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 ZNF823P16415 610 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 WFDC2Q14508 124 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 PYDC2Q56P42 97 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 NMSQ5H8A3 153 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 MIC13Q5XKP0 118 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 HMGN2P46Q86SG4 172 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 TMEM61Q8N0U2 210 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 OR5AS1Q8N127 324 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 METTL27Q8N6F8 245 aaPredicted RBP4.8□□□□□ -1.64
COPS3-216ENST00000579716 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 CHCHD5Q9BSY4 110 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 DPM3Q9P2X0 92 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 HHLA3Q9XRX5 114 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 TET3O43151 1660 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 WIZO95785 1651 aa4.8□□□□□ -1.64
COPS3-216ENST00000579716 CEP170Q5SW79 1584 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 LAMC3Q9Y6N6 1575 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
COPS3-216ENST00000579716 CREBL2O60519 120 aaPredicted RBP4.79□□□□□ -1.64
COPS3-216ENST00000579716 ZNF324O75467 553 aaPredicted RBP4.79□□□□□ -1.64
COPS3-216ENST00000579716 C1QAP02745 245 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 FGF12P61328 243 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 PCBD1P61457 104 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 RPL30P62888 115 aaKnown RBP4.79□□□□□ -1.64
COPS3-216ENST00000579716 CCL8P80075 99 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 REG3AQ06141 175 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 FUT5Q11128 374 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 ZC2HC1BQ5TFG8 222 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 Q8N2B8 174 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 CD177Q8N6Q3 437 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 NRACQ8N912 160 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 WFDC5Q8TCV5 224 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 CCL28Q9NRJ3 127 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 GREB1LQ9C091 1923 aaPredicted RBP4.79□□□□□ -1.64
COPS3-216ENST00000579716 KIAA0556O60303 1618 aa4.79□□□□□ -1.64
COPS3-216ENST00000579716 VWDEQ8N2E2 1590 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 C2orf16Q68DN1 1984 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 EFCAB6Q5THR3 1501 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 A0A0D9SFI3 127 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 TIMM17BO60830 172 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 COX7A1P24310 79 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 RNASE4P34096 147 aaKnown RBP4.78□□□□□ -1.64
COPS3-216ENST00000579716 KRTDAPP60985 99 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 SUMO4Q6EEV6 95 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 TMEM136Q6ZRR5 245 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
COPS3-216ENST00000579716 OR8B3Q8NGG8 313 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 FGF13Q92913 245 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 SDF2L1Q9HCN8 221 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 PRO0461Q9UI25 63 aa4.78□□□□□ -1.64
COPS3-216ENST00000579716 FXYD6-FXYD2A0A087WZ82 144 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 INAFM1C9JVW0 142 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 SLC25A14O95258 325 aaPredicted RBP4.77□□□□□ -1.65
COPS3-216ENST00000579716 IGHV3-48P01763 117 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 BGLAPP02818 100 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 SMIM13P0DJ93 91 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 MPV17P39210 176 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 FAM72AQ5TYM5 149 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 TIFABQ6ZNK6 161 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 SH2D6Q7Z4S9 175 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 ZNF645Q8N7E2 425 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 POM121L12Q8N7R1 296 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 SPTSSAQ969W0 71 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 TVP23CQ96ET8 276 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 TMEM204Q9BSN7 226 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 FXYD6Q9H0Q3 95 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 OSTCQ9NRP0 149 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 TAS2R4Q9NYW5 299 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 TOPAZ1Q8N9V7 1692 aa4.77□□□□□ -1.65
COPS3-216ENST00000579716 AHDC1Q5TGY3 1603 aaPredicted RBP4.76□□□□□ -1.65
COPS3-216ENST00000579716 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 UNC13BO14795 1591 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 HSPB1P04792 205 aaKnown RBP4.76□□□□□ -1.65
COPS3-216ENST00000579716 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.65
COPS3-216ENST00000579716 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
COPS3-216ENST00000579716 CIRBPQ14011 172 aaKnown RBP4.76□□□□□ -1.65
COPS3-216ENST00000579716 LAIR2Q6ISS4 152 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 CEND1Q8N111 149 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 CSNK1G2-AS1Q8NCQ2 148 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 GTSF1Q8WW33 167 aa4.76□□□□□ -1.65
COPS3-216ENST00000579716 LINC00597Q9H2U6 94 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms